RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C ESC1Q03661 1658 aaKnown RBP1.3□□□□□ -2.2
CTF18YMR078C YKL044WP36092 106 aa1.3□□□□□ -2.2
CTF18YMR078C URA2P07259 2214 aaKnown RBP1.29□□□□□ -2.2
CTF18YMR078C SSK2P53599 1579 aa1.29□□□□□ -2.2
CTF18YMR078C YBR056W-AI2HB52 66 aa1.29□□□□□ -2.2
CTF18YMR078C YLR194CQ05777 254 aa1.29□□□□□ -2.2
CTF18YMR078C TCB3Q03640 1545 aaKnown RBP1.28□□□□□ -2.2
CTF18YMR078C YLR157W-EP0CF00 54 aa1.28□□□□□ -2.2
CTF18YMR078C SAE3P89114 91 aa1.28□□□□□ -2.2
CTF18YMR078C MPC1P53157 130 aaKnown RBP1.28□□□□□ -2.2
CTF18YMR078C YMR321CQ04898 105 aa1.28□□□□□ -2.2
CTF18YMR078C PEP1P32319 1579 aa1.28□□□□□ -2.21
CTF18YMR078C RAD50P12753 1312 aa1.27□□□□□ -2.21
CTF18YMR078C POP7P38291 140 aa1.27□□□□□ -2.21
CTF18YMR078C MED11Q99278 115 aa1.27□□□□□ -2.21
CTF18YMR078C RPA190P10964 1664 aaKnown RBP1.27□□□□□ -2.21
CTF18YMR078C HPA2Q06592 156 aa1.27□□□□□ -2.21
CTF18YMR078C BNI1P41832 1953 aa1.26□□□□□ -2.21
CTF18YMR078C YIL014C-AQ02598 104 aa1.26□□□□□ -2.21
CTF18YMR078C NKP2Q06162 153 aa1.26□□□□□ -2.21
CTF18YMR078C GEA2P39993 1459 aaKnown RBP1.26□□□□□ -2.21
CTF18YMR078C TRM732Q03496 1420 aa1.26□□□□□ -2.21
CTF18YMR078C MRP49P32388 137 aa1.25□□□□□ -2.21
CTF18YMR078C GPI19Q04082 140 aa1.25□□□□□ -2.21
CTF18YMR078C BPT1P14772 1559 aa1.25□□□□□ -2.21
CTF18YMR078C CDC25P04821 1589 aa1.25□□□□□ -2.21
CTF18YMR078C YCF1P39109 1515 aaKnown RBP1.24□□□□□ -2.21
CTF18YMR078C MRPL31P14063 131 aaPredicted RBP1.24□□□□□ -2.21
CTF18YMR078C HIR3P47171 1648 aa1.24□□□□□ -2.21
CTF18YMR078C SIN3P22579 1536 aa1.24□□□□□ -2.21
CTF18YMR078C MMS1Q06211 1407 aa1.24□□□□□ -2.21
CTF18YMR078C RPO31P04051 1460 aa1.23□□□□□ -2.21
CTF18YMR078C DNF2Q12675 1612 aa1.23□□□□□ -2.21
CTF18YMR078C PDR15Q04182 1529 aaKnown RBP1.23□□□□□ -2.21
CTF18YMR078C BUD4P47136 1447 aa1.23□□□□□ -2.21
CTF18YMR078C SNF11P38956 169 aa1.23□□□□□ -2.21
CTF18YMR078C NTE1Q04958 1679 aa1.23□□□□□ -2.21
CTF18YMR078C ENV10Q99382 181 aa1.22□□□□□ -2.21
CTF18YMR078C YRF1-3P0CX14 1859 aa1.22□□□□□ -2.21
CTF18YMR078C YRF1-7P0CX15 1859 aa1.22□□□□□ -2.21
CTF18YMR078C PAU12P53343 120 aa1.2□□□□□ -2.22
CTF18YMR078C TY1B-HO13535 1793 aa1.2□□□□□ -2.22
CTF18YMR078C EMP24P32803 203 aaKnown RBP1.2□□□□□ -2.22
CTF18YMR078C SRX1P36077 127 aa1.2□□□□□ -2.22
CTF18YMR078C ECM5Q03214 1411 aa1.19□□□□□ -2.22
CTF18YMR078C RKR1Q04781 1562 aa1.19□□□□□ -2.22
CTF18YMR078C RPL22AP05749 121 aaKnown RBP1.18□□□□□ -2.22
CTF18YMR078C POR2P40478 281 aa1.18□□□□□ -2.22
CTF18YMR078C YLR099W-AQ3E798 87 aa1.18□□□□□ -2.22
CTF18YMR078C YJL197C-AP0C5P0 93 aa1.17□□□□□ -2.22
CTF18YMR078C YHR130CP38834 111 aa1.17□□□□□ -2.22
CTF18YMR078C YLR118CQ12354 227 aa1.16□□□□□ -2.22
CTF18YMR078C SPC24Q04477 213 aa1.16□□□□□ -2.22
CTF18YMR078C YJR128WP47162 119 aa1.15□□□□□ -2.23
CTF18YMR078C YLR285C-AQ3E771 56 aa1.15□□□□□ -2.23
CTF18YMR078C SLO1Q3E784 85 aa1.15□□□□□ -2.23
CTF18YMR078C LCL1Q02786 101 aa1.14□□□□□ -2.23
CTF18YMR078C SPT6P23615 1451 aaKnown RBP1.14□□□□□ -2.23
CTF18YMR078C YGR240C-AQ3E786 66 aa1.13□□□□□ -2.23
CTF18YMR078C CYB5P40312 120 aa1.13□□□□□ -2.23
CTF18YMR078C YFR035CP43608 114 aa1.13□□□□□ -2.23
CTF18YMR078C ATG2P53855 1592 aa1.12□□□□□ -2.23
CTF18YMR078C VMA7P39111 118 aa1.12□□□□□ -2.23
CTF18YMR078C DOP1Q03921 1698 aa1.12□□□□□ -2.23
CTF18YMR078C COX23P38824 151 aa1.11□□□□□ -2.23
CTF18YMR078C RPB11P38902 120 aa1.11□□□□□ -2.23
CTF18YMR078C AIM11P87275 137 aa1.11□□□□□ -2.23
CTF18YMR078C YPL261CQ08976 102 aa1.11□□□□□ -2.23
CTF18YMR078C SEC16P48415 2195 aaKnown RBP1.11□□□□□ -2.23
CTF18YMR078C TDA2P40045 126 aa1.1□□□□□ -2.23
CTF18YMR078C PCC1Q3E833 88 aa1.1□□□□□ -2.23
CTF18YMR078C OST5Q92316 86 aa1.1□□□□□ -2.23
CTF18YMR078C YPR117WQ06116 2489 aa1.1□□□□□ -2.23
CTF18YMR078C CHC1P22137 1653 aaKnown RBP1.09□□□□□ -2.23
CTF18YMR078C OCA6Q12454 224 aa1.09□□□□□ -2.23
CTF18YMR078C DNF3Q12674 1656 aa1.09□□□□□ -2.23
CTF18YMR078C VPS15P22219 1454 aa1.09□□□□□ -2.23
CTF18YMR078C ICS3P47034 131 aa1.09□□□□□ -2.24
CTF18YMR078C ESP1Q03018 1630 aa1.08□□□□□ -2.24
CTF18YMR078C AUA1P32450 94 aa1.08□□□□□ -2.24
CTF18YMR078C HAP1P0CE41 1502 aa1.08□□□□□ -2.24
CTF18YMR078C NUP170P38181 1502 aa1.08□□□□□ -2.24
CTF18YMR078C YGL041C-BQ3E750 60 aa1.08□□□□□ -2.24
CTF18YMR078C YPK9Q12697 1472 aa1.07□□□□□ -2.24
CTF18YMR078C YAR029WP39549 74 aa1.06□□□□□ -2.24
CTF18YMR078C SPO14P36126 1683 aa1.06□□□□□ -2.24
CTF18YMR078C GDB1Q06625 1536 aa1.06□□□□□ -2.24
CTF18YMR078C PAU24P38155 120 aa1.05□□□□□ -2.24
CTF18YMR078C ARL3Q02804 198 aa1.05□□□□□ -2.24
CTF18YMR078C FRQ1Q06389 190 aa1.05□□□□□ -2.24
CTF18YMR078C WIP1Q2V2P8 89 aa1.05□□□□□ -2.24
CTF18YMR078C IML1P47170 1584 aa1.05□□□□□ -2.24
CTF18YMR078C TY1B-NL2Q99337 1749 aaKnown RBP1.05□□□□□ -2.24
CTF18YMR078C PAU2P32612 120 aa1.05□□□□□ -2.24
CTF18YMR078C MRPS12P53732 153 aa1.05□□□□□ -2.24
CTF18YMR078C ULS1Q08562 1619 aa1.05□□□□□ -2.24
CTF18YMR078C SCC2Q04002 1493 aa1.05□□□□□ -2.24
CTF18YMR078C YOR097CQ12274 175 aaPredicted RBP1.04□□□□□ -2.24
CTF18YMR078C SNF2P22082 1703 aa1.04□□□□□ -2.24
CTF18YMR078C RPO41P13433 1351 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms