RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C YGR201CP42936 225 aa0.27□□□□□ -2.37
UBX4YMR067C GPI14P47088 403 aaKnown RBP0.27□□□□□ -2.37
UBX4YMR067C TTI2P47168 421 aa0.27□□□□□ -2.37
UBX4YMR067C YGL230CP53074 147 aa0.27□□□□□ -2.37
UBX4YMR067C MMS2P53152 137 aa0.27□□□□□ -2.37
UBX4YMR067C MPC1P53157 130 aaKnown RBP0.27□□□□□ -2.37
UBX4YMR067C HHT1P61830 136 aa0.27□□□□□ -2.37
UBX4YMR067C SGF11Q03067 99 aa0.27□□□□□ -2.37
UBX4YMR067C DML1Q03652 475 aa0.27□□□□□ -2.37
UBX4YMR067C YOL131WQ08270 108 aa0.27□□□□□ -2.37
UBX4YMR067C VAM10Q08474 114 aa0.27□□□□□ -2.37
UBX4YMR067C YDR010CQ12426 110 aa0.27□□□□□ -2.37
UBX4YMR067C CMC4Q3E7A9 73 aa0.27□□□□□ -2.37
UBX4YMR067C RIB3Q99258 208 aa0.27□□□□□ -2.37
UBX4YMR067C YDR034C-AP0C289 58 aa0.26□□□□□ -2.37
UBX4YMR067C HYP2P23301 157 aaKnown RBP0.26□□□□□ -2.37
UBX4YMR067C MRS4P23500 304 aa0.26□□□□□ -2.37
UBX4YMR067C YCR001WP25347 104 aa0.26□□□□□ -2.37
UBX4YMR067C ARC19P33204 171 aaKnown RBP0.26□□□□□ -2.37
UBX4YMR067C NUF2P33895 451 aa0.26□□□□□ -2.37
UBX4YMR067C MRPL38P35996 138 aaPredicted RBP0.26□□□□□ -2.37
UBX4YMR067C NSA2P40078 261 aaKnown RBP0.26□□□□□ -2.37
UBX4YMR067C SPC1P46965 94 aa0.26□□□□□ -2.37
UBX4YMR067C YGL101WP53144 215 aa0.26□□□□□ -2.37
UBX4YMR067C HSK3P69852 69 aa0.26□□□□□ -2.37
UBX4YMR067C YKR005CQ02203 525 aa0.26□□□□□ -2.37
UBX4YMR067C LCL1Q02786 101 aa0.26□□□□□ -2.37
UBX4YMR067C YPD1Q07688 167 aa0.26□□□□□ -2.37
UBX4YMR067C YOR289WQ12012 251 aaPredicted RBP0.26□□□□□ -2.37
UBX4YMR067C ATP20Q12233 115 aa0.26□□□□□ -2.37
UBX4YMR067C MPD1Q12404 318 aaKnown RBP0.26□□□□□ -2.37
UBX4YMR067C YKL018C-AQ3E7A7 99 aa0.26□□□□□ -2.37
UBX4YMR067C YOS1Q3E834 85 aa0.26□□□□□ -2.37
UBX4YMR067C RTC6O14464 93 aa0.25□□□□□ -2.37
UBX4YMR067C ADK1P07170 222 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C RPS11AP0CX47 156 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C RPS11BP0CX48 156 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C DDR48P18899 430 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C YCR101CP25607 182 aa0.25□□□□□ -2.37
UBX4YMR067C SHB17P36136 271 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C IPT1P38954 527 aa0.25□□□□□ -2.37
UBX4YMR067C CCS1P40202 249 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C RPS29AP41057 56 aaKnown RBP0.25□□□□□ -2.37
UBX4YMR067C NQM1P53228 333 aaPredicted RBP0.25□□□□□ -2.37
UBX4YMR067C TOM7P53507 60 aa0.25□□□□□ -2.37
UBX4YMR067C GAL83Q04739 417 aa0.25□□□□□ -2.37
UBX4YMR067C NOC4Q06512 552 aaPredicted RBP0.25□□□□□ -2.37
UBX4YMR067C YLR053CQ12026 108 aa0.25□□□□□ -2.37
UBX4YMR067C ATG41Q12048 136 aa0.25□□□□□ -2.37
UBX4YMR067C SPC3Q12133 184 aa0.25□□□□□ -2.37
UBX4YMR067C YOR011W-AQ3E807 68 aa0.25□□□□□ -2.37
UBX4YMR067C YLR307C-AQ3E825 87 aa0.25□□□□□ -2.37
UBX4YMR067C YCR075W-AQ3E830 75 aa0.25□□□□□ -2.37
UBX4YMR067C YHR213W-BQ8TGK1 99 aa0.25□□□□□ -2.37
UBX4YMR067C YOL013W-AP0C272 63 aaPredicted RBP0.24□□□□□ -2.37
UBX4YMR067C RRT1P38192 103 aa0.24□□□□□ -2.37
UBX4YMR067C YBR013CP38215 129 aa0.24□□□□□ -2.37
UBX4YMR067C YPT31P38555 223 aaKnown RBP0.24□□□□□ -2.37
UBX4YMR067C RPS20P38701 121 aaKnown RBP0.24□□□□□ -2.37
UBX4YMR067C SNF11P38956 169 aa0.24□□□□□ -2.37
UBX4YMR067C DLS1P40366 167 aa0.24□□□□□ -2.37
UBX4YMR067C POR2P40478 281 aa0.24□□□□□ -2.37
UBX4YMR067C LST8P41318 303 aa0.24□□□□□ -2.37
UBX4YMR067C GPI2P46961 280 aa0.24□□□□□ -2.37
UBX4YMR067C YIP3P53633 176 aa0.24□□□□□ -2.37
UBX4YMR067C SNO1Q03144 224 aa0.24□□□□□ -2.37
UBX4YMR067C GRX3Q03835 250 aa0.24□□□□□ -2.37
UBX4YMR067C COA4Q05809 96 aa0.24□□□□□ -2.37
UBX4YMR067C HUT1Q12520 339 aa0.24□□□□□ -2.37
UBX4YMR067C YGR240C-AQ3E786 66 aa0.24□□□□□ -2.37
UBX4YMR067C YLL066W-BQ8TGJ7 56 aa0.24□□□□□ -2.37
UBX4YMR067C RPL33AP05744 107 aaKnown RBP0.23□□□□□ -2.37
UBX4YMR067C PRE1P22141 198 aaKnown RBP0.23□□□□□ -2.37
UBX4YMR067C BUD23P25627 275 aaPredicted RBP0.23□□□□□ -2.37
UBX4YMR067C YHR138CP38841 114 aaPredicted RBP0.23□□□□□ -2.37
UBX4YMR067C HHY1P39982 102 aa0.23□□□□□ -2.37
UBX4YMR067C SNU13P39990 126 aaKnown RBP0.23□□□□□ -2.37
UBX4YMR067C SMX2P40204 77 aaKnown RBP0.23□□□□□ -2.37
UBX4YMR067C AIM19P40502 157 aa0.23□□□□□ -2.37
UBX4YMR067C EMC5P40540 141 aa0.23□□□□□ -2.37
UBX4YMR067C RPS29BP41058 56 aaKnown RBP0.23□□□□□ -2.37
UBX4YMR067C GNA1P43577 159 aaPredicted RBP0.23□□□□□ -2.37
UBX4YMR067C YGL149WP53116 101 aa0.23□□□□□ -2.37
UBX4YMR067C PGA1P53896 198 aa0.23□□□□□ -2.37
UBX4YMR067C RAV2Q03956 351 aa0.23□□□□□ -2.37
UBX4YMR067C YLR042CQ07990 161 aa0.23□□□□□ -2.37
UBX4YMR067C YOL118CQ08259 102 aa0.23□□□□□ -2.37
UBX4YMR067C YDR029WQ12111 104 aa0.23□□□□□ -2.37
UBX4YMR067C NSL1Q12143 216 aa0.23□□□□□ -2.37
UBX4YMR067C YOR192C-CQ3E736 78 aa0.23□□□□□ -2.37
UBX4YMR067C RRT15Q3E811 62 aa0.23□□□□□ -2.37
UBX4YMR067C KTI11Q3E840 82 aa0.23□□□□□ -2.37
UBX4YMR067C YPR010C-AA5Z2X5 72 aa0.22□□□□□ -2.37
UBX4YMR067C YGL041W-AP0C5N3 154 aa0.22□□□□□ -2.37
UBX4YMR067C PET54P10834 293 aa0.22□□□□□ -2.37
UBX4YMR067C UBC4P15731 148 aa0.22□□□□□ -2.37
UBX4YMR067C ATP7P30902 174 aa0.22□□□□□ -2.37
UBX4YMR067C PDX3P38075 228 aaKnown RBP0.22□□□□□ -2.37
UBX4YMR067C YBL071CP38185 102 aa0.22□□□□□ -2.37
UBX4YMR067C HPM1P40481 377 aa0.22□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms