RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C YKL070WP36087 169 aa9.91□□□□□ -0.82
BDF1YLR399C YER076CP40049 302 aa9.91□□□□□ -0.82
BDF1YLR399C MRPL39P36533 70 aa9.91□□□□□ -0.82
BDF1YLR399C PIR5P46999 287 aa9.91□□□□□ -0.82
BDF1YLR399C YIR021W-AQ3E739 70 aa9.91□□□□□ -0.82
BDF1YLR399C BNA2P47125 453 aa9.9□□□□□ -0.82
BDF1YLR399C YIP3P53633 176 aa9.9□□□□□ -0.82
BDF1YLR399C NUP53Q03790 475 aa9.9□□□□□ -0.82
BDF1YLR399C FCF1Q05498 189 aaPredicted RBP9.9□□□□□ -0.82
BDF1YLR399C RXT3Q07458 294 aa9.89□□□□□ -0.83
BDF1YLR399C YOR029WQ12243 111 aa9.89□□□□□ -0.83
BDF1YLR399C YHR213WP0CI67 198 aa9.88□□□□□ -0.83
BDF1YLR399C YHR140WP38842 239 aa9.88□□□□□ -0.83
BDF1YLR399C VTC1P40046 129 aaRIP-Chip data9.88□□□□□ -0.83not detected
BDF1YLR399C VHS2P40463 436 aa9.88□□□□□ -0.83
BDF1YLR399C FCY1Q12178 158 aa9.88□□□□□ -0.83
BDF1YLR399C YAL063C-AQ3E791 96 aa9.88□□□□□ -0.83
BDF1YLR399C YOR032W-AQ8TGS1 66 aa9.87□□□□□ -0.83
BDF1YLR399C COA3Q3E7B2 85 aa9.87□□□□□ -0.83
BDF1YLR399C IRA2P19158 3079 aa9.86□□□□□ -0.83
BDF1YLR399C SEN1Q00416 2231 aaKnown RBP9.86□□□□□ -0.83
BDF1YLR399C PFY1P07274 126 aa9.86□□□□□ -0.83
BDF1YLR399C SIP18P50263 79 aa9.86□□□□□ -0.83
BDF1YLR399C DMA2P53924 522 aa9.86□□□□□ -0.83
BDF1YLR399C KRE1P17260 313 aa9.85□□□□□ -0.83
BDF1YLR399C YKR045CP36138 183 aa9.85□□□□□ -0.83
BDF1YLR399C YGR039WP53225 103 aa9.85□□□□□ -0.83
BDF1YLR399C MRPL20P22354 195 aaPredicted RBP9.84□□□□□ -0.83
BDF1YLR399C IMP2P46972 177 aa9.84□□□□□ -0.83
BDF1YLR399C TIM22Q12328 207 aa9.84□□□□□ -0.83
BDF1YLR399C YLR342W-AQ3E810 57 aa9.84□□□□□ -0.83
BDF1YLR399C AGA1P32323 725 aa9.84□□□□□ -0.83
BDF1YLR399C YNL217WP40152 326 aa9.84□□□□□ -0.83
BDF1YLR399C FIP1P45976 327 aa9.83□□□□□ -0.84
BDF1YLR399C YLR361C-AQ3E795 98 aa9.83□□□□□ -0.84
BDF1YLR399C DSE2P38844 325 aa9.82□□□□□ -0.84
BDF1YLR399C GLE2P40066 365 aa9.82□□□□□ -0.84
BDF1YLR399C YMR181CQ03231 154 aa9.82□□□□□ -0.84
BDF1YLR399C YMR105W-AQ8TGS8 64 aa9.82□□□□□ -0.84
BDF1YLR399C IGO2Q9P305 131 aa9.82□□□□□ -0.84
BDF1YLR399C YER085CP40058 173 aa9.81□□□□□ -0.84
BDF1YLR399C TOS6P48560 102 aa9.81□□□□□ -0.84
BDF1YLR399C RRT1P38192 103 aa9.81□□□□□ -0.84
BDF1YLR399C YIP1P53039 248 aa9.81□□□□□ -0.84
BDF1YLR399C NRG2P38082 220 aa9.8□□□□□ -0.84
BDF1YLR399C RPL39P04650 51 aa9.79□□□□□ -0.84
BDF1YLR399C MSN1P22148 382 aa9.79□□□□□ -0.84
BDF1YLR399C MID2P36027 376 aa9.79□□□□□ -0.84
BDF1YLR399C RRG8Q06109 277 aa9.79□□□□□ -0.84
BDF1YLR399C YFL041W-AQ3E817 63 aa9.79□□□□□ -0.84
BDF1YLR399C CWP2P43497 92 aa9.79□□□□□ -0.84
BDF1YLR399C AIM34Q03673 198 aa9.79□□□□□ -0.84
BDF1YLR399C YTH1Q06102 208 aaPredicted RBP9.79□□□□□ -0.84
BDF1YLR399C KTI12P34253 313 aaKnown RBP9.78□□□□□ -0.84
BDF1YLR399C AIM11P87275 137 aa9.78□□□□□ -0.84
BDF1YLR399C ABF2Q02486 183 aa9.78□□□□□ -0.84
BDF1YLR399C YMR317WQ04893 1140 aa9.78□□□□□ -0.84
BDF1YLR399C RPS26AP39938 119 aaKnown RBP9.78□□□□□ -0.84
BDF1YLR399C YCH1P42937 148 aa9.78□□□□□ -0.84
BDF1YLR399C PRM7Q12459 698 aa9.78□□□□□ -0.84
BDF1YLR399C YPR053CQ6Q5F3 151 aa9.78□□□□□ -0.84
BDF1YLR399C VPS55P47111 140 aa9.76□□□□□ -0.85
BDF1YLR399C IRC23Q08416 157 aa9.76□□□□□ -0.85
BDF1YLR399C SPI1P40092 148 aa9.75□□□□□ -0.85
BDF1YLR399C YFL051CP43552 160 aa9.75□□□□□ -0.85
BDF1YLR399C GLO1P50107 326 aa9.75□□□□□ -0.85
BDF1YLR399C YDR209CQ03480 137 aa9.75□□□□□ -0.85
BDF1YLR399C YLR194CQ05777 254 aa9.75□□□□□ -0.85
BDF1YLR399C YJL027CP47063 138 aaPredicted RBP9.75□□□□□ -0.85
BDF1YLR399C YIA6P40556 373 aa9.74□□□□□ -0.85
BDF1YLR399C YDR119W-AQ2V2P9 66 aa9.74□□□□□ -0.85
BDF1YLR399C GAT3Q07928 141 aa9.73□□□□□ -0.85
BDF1YLR399C ENV10Q99382 181 aa9.73□□□□□ -0.85
BDF1YLR399C RPS8AP0CX39 200 aaKnown RBP9.73□□□□□ -0.85
BDF1YLR399C RPS8BP0CX40 200 aaKnown RBP9.73□□□□□ -0.85
BDF1YLR399C YCR085WP25650 117 aa9.73□□□□□ -0.85
BDF1YLR399C SKI6P46948 246 aaPredicted RBP9.73□□□□□ -0.85
BDF1YLR399C MRPL49P40858 161 aaPredicted RBP9.72□□□□□ -0.85
BDF1YLR399C MIC12P38341 106 aa9.71□□□□□ -0.85
BDF1YLR399C YDL186WP48568 277 aa9.71□□□□□ -0.86
BDF1YLR399C ATP15P21306 62 aa9.7□□□□□ -0.86
BDF1YLR399C YNL234WP53857 426 aa9.7□□□□□ -0.86
BDF1YLR399C MRPL23Q12487 163 aaPredicted RBP9.7□□□□□ -0.86
BDF1YLR399C YOR008C-AQ3E7B9 74 aa9.7□□□□□ -0.86
BDF1YLR399C Q0255P03881 472 aa9.7□□□□□ -0.86
BDF1YLR399C HFA1P32874 2273 aa9.69□□□□□ -0.86
BDF1YLR399C YNL190WP53872 204 aa9.69□□□□□ -0.86
BDF1YLR399C YOL160WQ08321 113 aa9.69□□□□□ -0.86
BDF1YLR399C YLR415CO13578 112 aa9.68□□□□□ -0.86
BDF1YLR399C RPL28P02406 149 aaKnown RBP9.68□□□□□ -0.86
BDF1YLR399C VMA11P32842 164 aa9.68□□□□□ -0.86
BDF1YLR399C KNH1P50112 268 aa9.68□□□□□ -0.86
BDF1YLR399C YCL021W-AQ96VH3 125 aa9.68□□□□□ -0.86
BDF1YLR399C YHR139C-AO13536 103 aa9.68□□□□□ -0.86
BDF1YLR399C MRPL24P36525 258 aaPredicted RBP9.67□□□□□ -0.86
BDF1YLR399C CTR2P38865 189 aa9.67□□□□□ -0.86
BDF1YLR399C ERF2Q06551 359 aa9.67□□□□□ -0.86
BDF1YLR399C UTH1P36135 365 aa9.67□□□□□ -0.86
BDF1YLR399C ADH5P38113 351 aaKnown RBP9.67□□□□□ -0.86
BDF1YLR399C COX12Q01519 83 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms