RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC22	YLR268W	APS2	Q00381	147 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	NHP10	Q03435	203 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	RUB1	Q03919	77 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	CSN9	Q03981	162 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	NKP2	Q06162	153 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	CNL1	Q06333	122 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	ZEO1	Q08245	113 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	WIP1	Q2V2P8	89 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	YKL068W-A	Q3E826	78 aa		0.45	□□□□□ -2.34
SEC22	YLR268W	HYM1	P32464	399 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	LHP1	P33399	275 aa	Known RBP	0.44	□□□□□ -2.34
SEC22	YLR268W	RPS20	P38701	121 aa	Known RBP	0.44	□□□□□ -2.34
SEC22	YLR268W	YEA6	P39953	335 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	RPS12	P48589	143 aa	Known RBP	0.44	□□□□□ -2.34
SEC22	YLR268W	AIM11	P87275	137 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	FCF2	Q12035	217 aa	Predicted RBP	0.44	□□□□□ -2.34
SEC22	YLR268W	OCA6	Q12454	224 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	YLR099W-A	Q3E798	87 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	YNL277W-A	Q3E7Z0	62 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	SPP41	P38904	1435 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	KRE5	P22023	1365 aa		0.44	□□□□□ -2.34
SEC22	YLR268W	REV3	P14284	1504 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	LAA1	P39526	2014 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	RPO31	P04051	1460 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	MRPL31	P14063	131 aa	Predicted RBP	0.43	□□□□□ -2.34
SEC22	YLR268W	MRP49	P32388	137 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	YBR090C	P38253	122 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	GTT1	P40582	234 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	PHS1	P40857	217 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	MPC1	P53157	130 aa	Known RBP	0.43	□□□□□ -2.34
SEC22	YLR268W	YGR164W	P53291	111 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	TIM8	P57744	87 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	TVP18	Q04767	167 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	YLR118C	Q12354	227 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	URA2	P07259	2214 aa	Known RBP	0.43	□□□□□ -2.34
SEC22	YLR268W	BUD4	P47136	1447 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	TRM732	Q03496	1420 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	SMC4	Q12267	1418 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	LYS2	P07702	1392 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	TCB3	Q03640	1545 aa	Known RBP	0.43	□□□□□ -2.34
SEC22	YLR268W	TY4B-J	P47024	1803 aa		0.43	□□□□□ -2.34
SEC22	YLR268W	GEA2	P39993	1459 aa	Known RBP	0.42	□□□□□ -2.34
SEC22	YLR268W	LTE1	P07866	1435 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	CAT8	P39113	1433 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	YBR056W-A	I2HB52	66 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	YER039C-A	P0CD97	72 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	UBC5	P15732	148 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	SRB6	P32570	121 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	TRS20	P38334	175 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	GNA1	P43577	159 aa	Predicted RBP	0.42	□□□□□ -2.34
SEC22	YLR268W	SFT1	P43682	97 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	ERV14	P53173	138 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	YLR194C	Q05777	254 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	SWC7	Q06707	132 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	YOR097C	Q12274	175 aa	Predicted RBP	0.42	□□□□□ -2.34
SEC22	YLR268W	YCR075W-A	Q3E830	75 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	YHR213W-A	Q8TGT4	77 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	RSF2	P46974	1380 aa		0.42	□□□□□ -2.34
SEC22	YLR268W	MYO2	P19524	1574 aa	Known RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	TOM1	Q03280	3268 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	TOR1	P35169	2470 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	GEA1	P47102	1408 aa	Predicted RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	YSP2	Q06681	1438 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	RPL36B	O14455	100 aa	Known RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	RPL36A	P05745	100 aa	Predicted RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	ADK1	P07170	222 aa	Known RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	YCR099C	P25657	155 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	YHR130C	P38834	111 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	RPB11	P38902	120 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	SNU13	P39990	126 aa	Known RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	SWM2	P40342	146 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	POR2	P40478	281 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	YMR090W	Q04304	227 aa	Known RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	YMR103C	Q04436	120 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	YLR042C	Q07990	161 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	SCP1	Q08873	200 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	XRN1	P22147	1528 aa	Known RBP	0.41	□□□□□ -2.34
SEC22	YLR268W	DNA2	P38859	1522 aa		0.41	□□□□□ -2.34
SEC22	YLR268W	VPS13	Q07878	3144 aa		0.4	□□□□□ -2.34
SEC22	YLR268W	PDR11	P40550	1411 aa		0.4	□□□□□ -2.34
SEC22	YLR268W	MMS1	Q06211	1407 aa		0.4	□□□□□ -2.34
SEC22	YLR268W	YRF1-3	P0CX14	1859 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	YRF1-7	P0CX15	1859 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	MON2	P48563	1636 aa	Predicted RBP	0.4	□□□□□ -2.35
SEC22	YLR268W	ECM12	O13529	151 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	UBC4	P15731	148 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	RPA12	P32529	125 aa	Known RBP	0.4	□□□□□ -2.35
SEC22	YLR268W	EMP24	P32803	203 aa	Known RBP	0.4	□□□□□ -2.35
SEC22	YLR268W	SRX1	P36077	127 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	SNF11	P38956	169 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	YIL163C	P40448	117 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	MSL1	P40567	111 aa	Predicted RBP	0.4	□□□□□ -2.35
SEC22	YLR268W	GAT4	P40569	121 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	VMA21	P41806	77 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	PAM16	P42949	149 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	RSM19	P53733	91 aa	Predicted RBP	0.4	□□□□□ -2.35
SEC22	YLR268W	YMR082C	Q04276	118 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	MIX14	Q04341	121 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	YGL194C-A	Q2V2P6	80 aa		0.4	□□□□□ -2.35
SEC22	YLR268W	YOS1	Q3E834	85 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms