RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C MIX17Q03667 156 aa8.82□□□□□ -1
SPT8YLR055C GPI19Q04082 140 aa8.82□□□□□ -1
SPT8YLR055C YMR103CQ04436 120 aa8.82□□□□□ -1
SPT8YLR055C YDL009CQ12210 107 aa8.82□□□□□ -1
SPT8YLR055C YLR342W-AQ3E810 57 aa8.82□□□□□ -1
SPT8YLR055C MST28P39552 234 aa8.81□□□□□ -1
SPT8YLR055C VTS1Q08831 523 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
SPT8YLR055C YPL073CP40323 161 aa8.8□□□□□ -1
SPT8YLR055C GLE2P40066 365 aa8.8□□□□□ -1
SPT8YLR055C YNL234WP53857 426 aa8.8□□□□□ -1
SPT8YLR055C SCW10Q04951 389 aa8.8□□□□□ -1
SPT8YLR055C DFM1Q12743 341 aaKnown RBP8.8□□□□□ -1
SPT8YLR055C URA2P07259 2214 aaKnown RBP8.79□□□□□ -1
SPT8YLR055C GPI18P38211 433 aa8.79□□□□□ -1
SPT8YLR055C YIP1P53039 248 aa8.79□□□□□ -1
SPT8YLR055C YLR296WQ05898 108 aa8.79□□□□□ -1
SPT8YLR055C YJL027CP47063 138 aaPredicted RBP8.78□□□□□ -1
SPT8YLR055C ELC1Q03071 99 aa8.78□□□□□ -1
SPT8YLR055C JID1Q12350 301 aa8.78□□□□□ -1
SPT8YLR055C HEM13P11353 328 aaKnown RBP8.77□□□□□ -1
SPT8YLR055C IES6P32617 166 aa8.77□□□□□ -1
SPT8YLR055C YHR140WP38842 239 aa8.77□□□□□ -1
SPT8YLR055C MOT3P54785 490 aaKnown RBP8.77□□□□□ -1
SPT8YLR055C MGR2Q02889 113 aa8.77□□□□□ -1
SPT8YLR055C IRC23Q08416 157 aa8.77□□□□□ -1
SPT8YLR055C YKL023C-AQ2V2P3 75 aa8.77□□□□□ -1
SPT8YLR055C CYC7P00045 113 aa8.77□□□□□ -1.01
SPT8YLR055C CMC1P36064 111 aa8.77□□□□□ -1.01
SPT8YLR055C SNU13P39990 126 aaKnown RBP8.77□□□□□ -1.01
SPT8YLR055C GEP3Q08622 556 aa8.77□□□□□ -1.01
SPT8YLR055C CDC43P18898 376 aa8.76□□□□□ -1.01
SPT8YLR055C SNF11P38956 169 aa8.76□□□□□ -1.01
SPT8YLR055C UBC7Q02159 165 aa8.76□□□□□ -1.01
SPT8YLR055C AQY1P0CD91 305 aa8.75□□□□□ -1.01
SPT8YLR055C YER076CP40049 302 aa8.75□□□□□ -1.01
SPT8YLR055C YLR112WQ12130 139 aa8.75□□□□□ -1.01
SPT8YLR055C TIM22Q12328 207 aa8.75□□□□□ -1.01
SPT8YLR055C VMA11P32842 164 aa8.75□□□□□ -1.01
SPT8YLR055C ATP23P53722 227 aa8.75□□□□□ -1.01
SPT8YLR055C PCL2P25693 308 aa8.74□□□□□ -1.01
SPT8YLR055C YGR045CP53229 120 aa8.73□□□□□ -1.01
SPT8YLR055C FCF1Q05498 189 aaPredicted RBP8.73□□□□□ -1.01
SPT8YLR055C PFY1P07274 126 aa8.73□□□□□ -1.01
SPT8YLR055C MRPL38P35996 138 aaPredicted RBP8.73□□□□□ -1.01
SPT8YLR055C FCY1Q12178 158 aa8.73□□□□□ -1.01
SPT8YLR055C YKR041WP36134 250 aa8.72□□□□□ -1.01
SPT8YLR055C SUT1P53032 299 aaKnown RBP8.71□□□□□ -1.01
SPT8YLR055C YOR097CQ12274 175 aaPredicted RBP8.71□□□□□ -1.01
SPT8YLR055C HMRA2P0CY13 119 aa8.7□□□□□ -1.02
SPT8YLR055C YAR1P46683 200 aa8.7□□□□□ -1.02
SPT8YLR055C PBP4Q07362 185 aaKnown RBP8.7□□□□□ -1.02
SPT8YLR055C YKL070WP36087 169 aa8.7□□□□□ -1.02
SPT8YLR055C YER181CP40097 107 aa8.7□□□□□ -1.02
SPT8YLR055C DIA1P54005 336 aa8.7□□□□□ -1.02
SPT8YLR055C YPL261CQ08976 102 aa8.7□□□□□ -1.02
SPT8YLR055C YOL160WQ08321 113 aa8.69□□□□□ -1.02
SPT8YLR055C YEL067CP39978 195 aa8.68□□□□□ -1.02
SPT8YLR055C MSA1Q08471 629 aa8.68□□□□□ -1.02
SPT8YLR055C RPB9P27999 122 aa8.68□□□□□ -1.02
SPT8YLR055C RPL32P38061 130 aaKnown RBP8.68□□□□□ -1.02
SPT8YLR055C TOS6P48560 102 aa8.68□□□□□ -1.02
SPT8YLR055C COA3Q3E7B2 85 aa8.68□□□□□ -1.02
SPT8YLR055C NUP42P49686 430 aaKnown RBP8.67□□□□□ -1.02
SPT8YLR055C YMR317WQ04893 1140 aa8.67□□□□□ -1.02
SPT8YLR055C KTI12P34253 313 aaKnown RBP8.66□□□□□ -1.02
SPT8YLR055C OXA1P39952 402 aa8.66□□□□□ -1.02
SPT8YLR055C NHP2P32495 156 aaPredicted RBP8.66□□□□□ -1.02
SPT8YLR055C PRE3P38624 215 aa8.66□□□□□ -1.02
SPT8YLR055C PRM3Q08931 133 aa8.66□□□□□ -1.02
SPT8YLR055C YDL022C-AP0C5L6 82 aa8.65□□□□□ -1.02
SPT8YLR055C POR2P40478 281 aa8.65□□□□□ -1.02
SPT8YLR055C YFR057WP43625 151 aa8.65□□□□□ -1.02
SPT8YLR055C YNR077CP53758 84 aa8.65□□□□□ -1.02
SPT8YLR055C DUT1P33317 147 aa8.64□□□□□ -1.03
SPT8YLR055C WWM1P43582 211 aaKnown RBP8.64□□□□□ -1.03
SPT8YLR055C YER145C-AA0A023PYF4 145 aa8.64□□□□□ -1.03
SPT8YLR055C YOR304C-AO14468 76 aa8.64□□□□□ -1.03
SPT8YLR055C VAR1P02381 398 aa8.64□□□□□ -1.03
SPT8YLR055C AGA1P32323 725 aa8.64□□□□□ -1.03
SPT8YLR055C LCB3P47013 409 aa8.64□□□□□ -1.03
SPT8YLR055C YMR181CQ03231 154 aa8.64□□□□□ -1.03
SPT8YLR055C RPL15AP05748 204 aaKnown RBP8.63□□□□□ -1.03
SPT8YLR055C ATX1P38636 73 aa8.63□□□□□ -1.03
SPT8YLR055C SPI1P40092 148 aa8.63□□□□□ -1.03
SPT8YLR055C CCW14O13547 238 aa8.61□□□□□ -1.03
SPT8YLR055C MRPL49P40858 161 aaPredicted RBP8.61□□□□□ -1.03
SPT8YLR055C OST2P46964 130 aa8.61□□□□□ -1.03
SPT8YLR055C GLO1P50107 326 aa8.61□□□□□ -1.03
SPT8YLR055C BNA1P47096 177 aa8.61□□□□□ -1.03
SPT8YLR055C PHO85P17157 305 aa8.6□□□□□ -1.03
SPT8YLR055C YNL217WP40152 326 aa8.6□□□□□ -1.03
SPT8YLR055C YGR025WP53216 100 aa8.6□□□□□ -1.03
SPT8YLR055C INO4P13902 151 aa8.59□□□□□ -1.03
SPT8YLR055C YGR219WP53307 113 aa8.59□□□□□ -1.03
SPT8YLR055C YNL184CP53876 108 aa8.59□□□□□ -1.03
SPT8YLR055C IGO2Q9P305 131 aa8.59□□□□□ -1.03
SPT8YLR055C AIM11P87275 137 aa8.59□□□□□ -1.03
SPT8YLR055C LSM6Q06406 86 aaKnown RBP8.59□□□□□ -1.03
SPT8YLR055C UTP20P35194 2493 aaKnown RBP8.58□□□□□ -1.04
SPT8YLR055C VTC1P40046 129 aaRIP-Chip data8.58□□□□□ -1.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms