RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C RPL2AP0CX45 254 aaKnown RBP2.01□□□□□ -2.09
SDO1YLR022C RPL2BP0CX46 254 aaKnown RBP2.01□□□□□ -2.09
SDO1YLR022C SHE2P36068 246 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SDO1YLR022C YKR032WP36127 104 aa2.01□□□□□ -2.09
SDO1YLR022C SNU13P39990 126 aaKnown RBP2.01□□□□□ -2.09
SDO1YLR022C FCY21P40039 528 aa2.01□□□□□ -2.09
SDO1YLR022C SPC1P46965 94 aa2.01□□□□□ -2.09
SDO1YLR022C GRX5Q02784 150 aa2.01□□□□□ -2.09
SDO1YLR022C MRPS8Q03799 155 aa2.01□□□□□ -2.09
SDO1YLR022C THI74Q04083 370 aa2.01□□□□□ -2.09
SDO1YLR022C YML100W-AQ8TGT0 57 aa2.01□□□□□ -2.09
SDO1YLR022C ODC2Q99297 307 aa2.01□□□□□ -2.09
SDO1YLR022C ATP15P21306 62 aa2□□□□□ -2.09
SDO1YLR022C RPB7P34087 171 aa2□□□□□ -2.09
SDO1YLR022C YHR138CP38841 114 aaPredicted RBP2□□□□□ -2.09
SDO1YLR022C GVP36P40531 326 aaKnown RBP2□□□□□ -2.09
SDO1YLR022C YDR366CP87287 132 aa2□□□□□ -2.09
SDO1YLR022C DYN2Q02647 92 aa2□□□□□ -2.09
SDO1YLR022C MEU1Q07938 337 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SDO1YLR022C DDR48P18899 430 aaKnown RBP1.99□□□□□ -2.09
SDO1YLR022C RRT1P38192 103 aa1.99□□□□□ -2.09
SDO1YLR022C YPL073CP40323 161 aa1.99□□□□□ -2.09
SDO1YLR022C GPI2P46961 280 aa1.99□□□□□ -2.09
SDO1YLR022C UBC7Q02159 165 aa1.99□□□□□ -2.09
SDO1YLR022C LCL1Q02786 101 aa1.99□□□□□ -2.09
SDO1YLR022C COA4Q05809 96 aa1.99□□□□□ -2.09
SDO1YLR022C YOL014WQ08110 124 aa1.99□□□□□ -2.09
SDO1YLR022C RAD28Q12021 506 aa1.99□□□□□ -2.09
SDO1YLR022C YLR361C-AQ3E795 98 aa1.99□□□□□ -2.09
SDO1YLR022C YAR023CD6VPM8 179 aa1.98□□□□□ -2.09
SDO1YLR022C SCM4P32564 187 aa1.98□□□□□ -2.09
SDO1YLR022C PAN3P36102 679 aaPredicted RBP1.98□□□□□ -2.09
SDO1YLR022C YER135CP40082 130 aa1.98□□□□□ -2.09
SDO1YLR022C PGD1P40356 397 aa1.98□□□□□ -2.09
SDO1YLR022C VMA10P48836 114 aaKnown RBP1.98□□□□□ -2.09
SDO1YLR022C YGR039WP53225 103 aa1.98□□□□□ -2.09
SDO1YLR022C COF1Q03048 143 aaKnown RBP1.98□□□□□ -2.09
SDO1YLR022C YMR295CQ03559 197 aa1.98□□□□□ -2.09
SDO1YLR022C SPC24Q04477 213 aa1.98□□□□□ -2.09
SDO1YLR022C NMA1Q06178 401 aaKnown RBP1.98□□□□□ -2.09
SDO1YLR022C FEX1Q08913 375 aa1.98□□□□□ -2.09
SDO1YLR022C FEX2Q08991 375 aa1.98□□□□□ -2.09
SDO1YLR022C YNL146C-AQ3E7Z1 64 aa1.98□□□□□ -2.09
SDO1YLR022C RTC6O14464 93 aa1.97□□□□□ -2.09
SDO1YLR022C COX9P07255 59 aa1.97□□□□□ -2.09
SDO1YLR022C YHR032W-AP0C5N6 59 aa1.97□□□□□ -2.09
SDO1YLR022C NSA2P40078 261 aaKnown RBP1.97□□□□□ -2.09
SDO1YLR022C YIL059CP40520 121 aa1.97□□□□□ -2.09
SDO1YLR022C YFL019CP43576 117 aa1.97□□□□□ -2.09
SDO1YLR022C DIE2P50076 525 aa1.97□□□□□ -2.09
SDO1YLR022C HHO1P53551 258 aa1.97□□□□□ -2.09
SDO1YLR022C VPS28Q02767 242 aa1.97□□□□□ -2.09
SDO1YLR022C SHH3Q04487 196 aa1.97□□□□□ -2.09
SDO1YLR022C HRD1Q08109 551 aa1.97□□□□□ -2.09
SDO1YLR022C YOR268CQ08734 132 aa1.97□□□□□ -2.09
SDO1YLR022C BOL1Q3E793 110 aa1.97□□□□□ -2.09
SDO1YLR022C YLR307C-AQ3E825 87 aa1.97□□□□□ -2.09
SDO1YLR022C ATP5P09457 212 aa1.96□□□□□ -2.1
SDO1YLR022C YGR025WP53216 100 aa1.96□□□□□ -2.1
SDO1YLR022C ORM1P53224 222 aa1.96□□□□□ -2.1
SDO1YLR022C PAU12P53343 120 aa1.96□□□□□ -2.1
SDO1YLR022C SDH7Q04401 133 aa1.96□□□□□ -2.1
SDO1YLR022C YMR252CQ04814 134 aa1.96□□□□□ -2.1
SDO1YLR022C YMR320WQ04897 101 aa1.96□□□□□ -2.1
SDO1YLR022C NAT3Q06504 195 aa1.96□□□□□ -2.1
SDO1YLR022C SLO1Q3E784 85 aa1.96□□□□□ -2.1
SDO1YLR022C RAD6P06104 172 aa1.95□□□□□ -2.1
SDO1YLR022C CSH1P38287 376 aa1.95□□□□□ -2.1
SDO1YLR022C VTC1P40046 129 aaRIP-Chip data1.95□□□□□ -2.1not detected
SDO1YLR022C CNL1Q06333 122 aa1.95□□□□□ -2.1
SDO1YLR022C YPR108W-AQ3E7B3 70 aa1.95□□□□□ -2.1
SDO1YLR022C YLR365WQ7LIF2 110 aa1.95□□□□□ -2.1
SDO1YLR022C YLL066W-BQ8TGJ7 56 aa1.95□□□□□ -2.1
SDO1YLR022C POR1P04840 283 aaKnown RBP1.94□□□□□ -2.1
SDO1YLR022C TIR1P10863 254 aa1.94□□□□□ -2.1
SDO1YLR022C HYP2P23301 157 aaKnown RBP1.94□□□□□ -2.1
SDO1YLR022C SFK1P35735 353 aa1.94□□□□□ -2.1
SDO1YLR022C PAU24P38155 120 aa1.94□□□□□ -2.1
SDO1YLR022C VMA7P39111 118 aa1.94□□□□□ -2.1
SDO1YLR022C YER181CP40097 107 aa1.94□□□□□ -2.1
SDO1YLR022C SBH1P52870 82 aa1.94□□□□□ -2.1
SDO1YLR022C FSF1Q12029 327 aaKnown RBP1.94□□□□□ -2.1
SDO1YLR022C WIP1Q2V2P8 89 aa1.94□□□□□ -2.1
SDO1YLR022C RPL26AP05743 127 aaKnown RBP1.93□□□□□ -2.1
SDO1YLR022C MRPL24P36525 258 aaPredicted RBP1.93□□□□□ -2.1
SDO1YLR022C YBL071CP38185 102 aa1.93□□□□□ -2.1
SDO1YLR022C HTD2P38790 280 aaKnown RBP1.93□□□□□ -2.1
SDO1YLR022C SVP26P38869 228 aa1.93□□□□□ -2.1
SDO1YLR022C SPC25P40014 221 aa1.93□□□□□ -2.1
SDO1YLR022C RPL33BP41056 107 aaKnown RBP1.93□□□□□ -2.1
SDO1YLR022C PAM16P42949 149 aa1.93□□□□□ -2.1
SDO1YLR022C DOC1P53068 250 aa1.93□□□□□ -2.1
SDO1YLR022C YGL193CP53097 103 aa1.93□□□□□ -2.1
SDO1YLR022C RPL26BP53221 127 aaKnown RBP1.93□□□□□ -2.1
SDO1YLR022C FRQ1Q06389 190 aa1.93□□□□□ -2.1
SDO1YLR022C YGR240C-AQ3E786 66 aa1.93□□□□□ -2.1
SDO1YLR022C RRT15Q3E811 62 aa1.93□□□□□ -2.1
SDO1YLR022C HUG1Q6Q5K6 68 aa1.93□□□□□ -2.1
SDO1YLR022C SRP21P32342 167 aa1.92□□□□□ -2.1
SDO1YLR022C PAU2P32612 120 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms