RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YPR011CQ12251 326 aa4.45□□□□□ -1.7
VPS1YKR001C MHF2Q3E829 80 aa4.45□□□□□ -1.7
VPS1YKR001C HTL1Q9URQ5 78 aa4.45□□□□□ -1.7
VPS1YKR001C POP3P53833 195 aaPredicted RBP4.45□□□□□ -1.7
VPS1YKR001C YDR042CQ03205 200 aa4.45□□□□□ -1.7
VPS1YKR001C YOR385WQ08909 290 aa4.45□□□□□ -1.7
VPS1YKR001C PIR5P46999 287 aa4.44□□□□□ -1.7
VPS1YKR001C MTR3P48240 250 aaPredicted RBP4.44□□□□□ -1.7
VPS1YKR001C YLR296WQ05898 108 aa4.44□□□□□ -1.7
VPS1YKR001C YBR255C-AQ3E776 120 aa4.44□□□□□ -1.7
VPS1YKR001C RRT15Q3E811 62 aa4.44□□□□□ -1.7
VPS1YKR001C YHR214C-EQ8TGK0 99 aa4.44□□□□□ -1.7
VPS1YKR001C ARF1P11076 181 aaKnown RBP4.43□□□□□ -1.7
VPS1YKR001C YOR292CQ08743 309 aa4.43□□□□□ -1.7
VPS1YKR001C YPL247CQ12523 523 aa4.43□□□□□ -1.7
VPS1YKR001C YOR032W-AQ8TGS1 66 aa4.43□□□□□ -1.7
VPS1YKR001C RPL16AP26784 199 aaKnown RBP4.43□□□□□ -1.7
VPS1YKR001C RPL16BP26785 198 aaKnown RBP4.43□□□□□ -1.7
VPS1YKR001C YGL034CP53186 121 aa4.43□□□□□ -1.7
VPS1YKR001C YNR064CP53750 290 aa4.43□□□□□ -1.7
VPS1YKR001C SPG4Q04438 115 aa4.43□□□□□ -1.7
VPS1YKR001C HPA2Q06592 156 aa4.43□□□□□ -1.7
VPS1YKR001C ODC2Q99297 307 aa4.43□□□□□ -1.7
VPS1YKR001C MDH2P22133 377 aa4.42□□□□□ -1.7
VPS1YKR001C BET1P22804 142 aa4.42□□□□□ -1.7
VPS1YKR001C SWD3P38123 315 aa4.42□□□□□ -1.7
VPS1YKR001C YHL042WP38729 150 aa4.42□□□□□ -1.7
VPS1YKR001C YGL193CP53097 103 aa4.42□□□□□ -1.7
VPS1YKR001C RIM9Q04734 239 aa4.42□□□□□ -1.7
VPS1YKR001C Q0010Q9ZZX9 128 aa4.42□□□□□ -1.7
VPS1YKR001C UBC13P52490 153 aa4.42□□□□□ -1.7
VPS1YKR001C SYM1Q06563 197 aa4.42□□□□□ -1.7
VPS1YKR001C NIP7Q08962 181 aaKnown RBP4.42□□□□□ -1.7
VPS1YKR001C YLR112WQ12130 139 aa4.42□□□□□ -1.7
VPS1YKR001C EMC6Q12431 108 aa4.42□□□□□ -1.7
VPS1YKR001C YPL038W-AQ3E7B4 63 aa4.42□□□□□ -1.7
VPS1YKR001C SNF11P38956 169 aa4.41□□□□□ -1.7
VPS1YKR001C ECO1P43605 281 aa4.41□□□□□ -1.7
VPS1YKR001C YGL088WP53151 121 aa4.41□□□□□ -1.7
VPS1YKR001C RSM19P53733 91 aaPredicted RBP4.41□□□□□ -1.7
VPS1YKR001C COX12Q01519 83 aa4.41□□□□□ -1.7
VPS1YKR001C YDL211CQ12121 372 aa4.41□□□□□ -1.7
VPS1YKR001C HSP12P22943 109 aaKnown RBP4.4□□□□□ -1.7
VPS1YKR001C RRT13P40042 185 aa4.4□□□□□ -1.7
VPS1YKR001C RRT7Q07829 113 aa4.4□□□□□ -1.7
VPS1YKR001C YKL023C-AQ2V2P3 75 aa4.4□□□□□ -1.7
VPS1YKR001C GPX1P36014 167 aa4.4□□□□□ -1.71
VPS1YKR001C RPL32P38061 130 aaKnown RBP4.4□□□□□ -1.71
VPS1YKR001C RPP1P38786 293 aa4.4□□□□□ -1.71
VPS1YKR001C YFR035CP43608 114 aa4.4□□□□□ -1.71
VPS1YKR001C HAL1Q01766 294 aa4.4□□□□□ -1.71
VPS1YKR001C YOR015WQ12169 119 aa4.4□□□□□ -1.71
VPS1YKR001C YMR030W-AQ3E760 96 aa4.4□□□□□ -1.71
VPS1YKR001C YIL165CP40446 119 aa4.39□□□□□ -1.71
VPS1YKR001C MIX14Q04341 121 aa4.39□□□□□ -1.71
VPS1YKR001C ELP6Q04868 273 aa4.39□□□□□ -1.71
VPS1YKR001C YLR346CQ06139 101 aa4.39□□□□□ -1.71
VPS1YKR001C KEG1P43614 200 aa4.38□□□□□ -1.71
VPS1YKR001C YGR050CP53231 118 aa4.38□□□□□ -1.71
VPS1YKR001C RPL21AQ02753 160 aaKnown RBP4.38□□□□□ -1.71
VPS1YKR001C YOR105WQ08504 108 aa4.38□□□□□ -1.71
VPS1YKR001C RPL21BQ12672 160 aaKnown RBP4.38□□□□□ -1.71
VPS1YKR001C FLO9P39712 1322 aa4.38□□□□□ -1.71
VPS1YKR001C YSF3P0C074 85 aaPredicted RBP4.37□□□□□ -1.71
VPS1YKR001C ERG4P25340 473 aa4.37□□□□□ -1.71
VPS1YKR001C YLR146W-AQ2V2P1 62 aa4.37□□□□□ -1.71
VPS1YKR001C YDR381C-AQ3E6R5 114 aa4.37□□□□□ -1.71
VPS1YKR001C FZF1P32805 299 aa4.37□□□□□ -1.71
VPS1YKR001C FLO5P38894 1075 aa4.37□□□□□ -1.71
VPS1YKR001C YAR068WP39564 161 aa4.37□□□□□ -1.71
VPS1YKR001C YFL019CP43576 117 aa4.37□□□□□ -1.71
VPS1YKR001C PGU1P47180 361 aa4.37□□□□□ -1.71
VPS1YKR001C YGR018CP53211 109 aa4.37□□□□□ -1.71
VPS1YKR001C YLR365WQ7LIF2 110 aa4.37□□□□□ -1.71
VPS1YKR001C BLM10P43583 2143 aa4.37□□□□□ -1.71
VPS1YKR001C YHR139C-AO13536 103 aa4.36□□□□□ -1.71
VPS1YKR001C YHR213WP0CI67 198 aa4.36□□□□□ -1.71
VPS1YKR001C WWM1P43582 211 aaKnown RBP4.36□□□□□ -1.71
VPS1YKR001C RPL15AP05748 204 aaKnown RBP4.36□□□□□ -1.71
VPS1YKR001C ASK1P35734 292 aa4.36□□□□□ -1.71
VPS1YKR001C MRPL39P36533 70 aa4.36□□□□□ -1.71
VPS1YKR001C YNL217WP40152 326 aa4.36□□□□□ -1.71
VPS1YKR001C YNL195CP40168 261 aa4.36□□□□□ -1.71
VPS1YKR001C YIL169CP40442 995 aa4.36□□□□□ -1.71
VPS1YKR001C DFG10P40526 253 aa4.36□□□□□ -1.71
VPS1YKR001C RPL15BP54780 204 aaPredicted RBP4.36□□□□□ -1.71
VPS1YKR001C USV1Q12132 391 aa4.36□□□□□ -1.71
VPS1YKR001C AYT1Q12226 474 aa4.36□□□□□ -1.71
VPS1YKR001C NPC2Q12408 173 aa4.36□□□□□ -1.71
VPS1YKR001C YKL018C-AQ3E7A7 99 aa4.36□□□□□ -1.71
VPS1YKR001C YAL064W-BO13512 126 aa4.35□□□□□ -1.71
VPS1YKR001C YPT10P38146 199 aa4.35□□□□□ -1.71
VPS1YKR001C PTH1P38876 190 aaKnown RBP4.35□□□□□ -1.71
VPS1YKR001C SPS100P13130 326 aa4.34□□□□□ -1.71
VPS1YKR001C IMP1P28627 190 aa4.34□□□□□ -1.71
VPS1YKR001C SKI6P46948 246 aaPredicted RBP4.34□□□□□ -1.71
VPS1YKR001C VPS55P47111 140 aa4.34□□□□□ -1.71
VPS1YKR001C TPC1P53257 314 aa4.34□□□□□ -1.71
VPS1YKR001C LSM6Q06406 86 aaKnown RBP4.34□□□□□ -1.71
VPS1YKR001C YML100W-AQ8TGT0 57 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms