RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W MET31Q03081 177 aa2.49□□□□□ -2.01
UBP12YJL197W RPL13AQ12690 199 aaPredicted RBP2.49□□□□□ -2.01
UBP12YJL197W HAP2P06774 265 aa2.48□□□□□ -2.01
UBP12YJL197W RPB7P34087 171 aa2.48□□□□□ -2.01
UBP12YJL197W HYR1P40581 163 aaKnown RBP2.48□□□□□ -2.01
UBP12YJL197W UTR5P32630 166 aa2.48□□□□□ -2.01
UBP12YJL197W YGR164WP53291 111 aa2.48□□□□□ -2.01
UBP12YJL197W KRE5P22023 1365 aa2.47□□□□□ -2.01
UBP12YJL197W CHC1P22137 1653 aaKnown RBP2.47□□□□□ -2.01
UBP12YJL197W NUP159P40477 1460 aa2.47□□□□□ -2.01
UBP12YJL197W YMR103CQ04436 120 aa2.47□□□□□ -2.01
UBP12YJL197W TY1B-NL2Q99337 1749 aaKnown RBP2.47□□□□□ -2.01
UBP12YJL197W YEA6P39953 335 aa2.47□□□□□ -2.01
UBP12YJL197W PEP8P40335 379 aa2.47□□□□□ -2.01
UBP12YJL197W YFR035CP43608 114 aa2.47□□□□□ -2.01
UBP12YJL197W BUD3P25558 1636 aa2.46□□□□□ -2.02
UBP12YJL197W FUN14P18411 198 aa2.46□□□□□ -2.02
UBP12YJL197W PRM7Q12459 698 aa2.46□□□□□ -2.02
UBP12YJL197W HAP3P13434 144 aa2.46□□□□□ -2.02
UBP12YJL197W UBC5P15732 148 aa2.46□□□□□ -2.02
UBP12YJL197W ECM31P38122 312 aa2.46□□□□□ -2.02
UBP12YJL197W PAU21P0CE86 164 aa2.45□□□□□ -2.02
UBP12YJL197W PAU22P0CE87 164 aa2.45□□□□□ -2.02
UBP12YJL197W YPL067CQ02754 198 aa2.45□□□□□ -2.02
UBP12YJL197W GPI11Q06636 219 aa2.45□□□□□ -2.02
UBP12YJL197W GDB1Q06625 1536 aa2.45□□□□□ -2.02
UBP12YJL197W YMR090WQ04304 227 aaKnown RBP2.45□□□□□ -2.02
UBP12YJL197W MMS22Q06164 1454 aa2.45□□□□□ -2.02
UBP12YJL197W PDR12Q02785 1511 aa2.45□□□□□ -2.02
UBP12YJL197W MRPL15P36523 253 aa2.45□□□□□ -2.02
UBP12YJL197W DCV1P43595 202 aa2.45□□□□□ -2.02
UBP12YJL197W SSN2P38931 1420 aa2.44□□□□□ -2.02
UBP12YJL197W ARO1P08566 1588 aaKnown RBP2.44□□□□□ -2.02
UBP12YJL197W YEL014CP39999 101 aa2.44□□□□□ -2.02
UBP12YJL197W YDL012CQ12489 107 aa2.44□□□□□ -2.02
UBP12YJL197W MHF1Q3E835 90 aa2.44□□□□□ -2.02
UBP12YJL197W AIM18P38884 321 aa2.44□□□□□ -2.02
UBP12YJL197W HRT1Q08273 121 aa2.44□□□□□ -2.02
UBP12YJL197W YLR365WQ7LIF2 110 aa2.44□□□□□ -2.02
UBP12YJL197W YKR045CP36138 183 aa2.43□□□□□ -2.02
UBP12YJL197W MIX17Q03667 156 aa2.43□□□□□ -2.02
UBP12YJL197W IPT1P38954 527 aa2.43□□□□□ -2.02
UBP12YJL197W CMC4Q3E7A9 73 aa2.43□□□□□ -2.02
UBP12YJL197W YLR422WQ06409 1932 aa2.43□□□□□ -2.02
UBP12YJL197W TY3B-GQ99315 1547 aa2.43□□□□□ -2.02
UBP12YJL197W BRP1P53194 125 aa2.43□□□□□ -2.02
UBP12YJL197W ULS1Q08562 1619 aa2.42□□□□□ -2.02
UBP12YJL197W YGL010WP25338 174 aa2.42□□□□□ -2.02
UBP12YJL197W PDR11P40550 1411 aa2.42□□□□□ -2.02
UBP12YJL197W YFL051CP43552 160 aa2.41□□□□□ -2.02
UBP12YJL197W YHR130CP38834 111 aa2.41□□□□□ -2.02
UBP12YJL197W SWC7Q06707 132 aa2.41□□□□□ -2.02
UBP12YJL197W DAD1Q12248 94 aa2.41□□□□□ -2.02
UBP12YJL197W IGO1P53897 168 aa2.41□□□□□ -2.02
UBP12YJL197W UBR1P19812 1950 aa2.41□□□□□ -2.02
UBP12YJL197W EMP24P32803 203 aaKnown RBP2.4□□□□□ -2.02
UBP12YJL197W MRPL11P36521 249 aaPredicted RBP2.4□□□□□ -2.02
UBP12YJL197W VMA21P41806 77 aa2.4□□□□□ -2.02
UBP12YJL197W YPL261CQ08976 102 aa2.4□□□□□ -2.02
UBP12YJL197W COA6Q3E846 104 aa2.4□□□□□ -2.02
UBP12YJL197W RPL36BO14455 100 aaKnown RBP2.4□□□□□ -2.03
UBP12YJL197W RPL36AP05745 100 aaPredicted RBP2.4□□□□□ -2.03
UBP12YJL197W DAN1P47178 298 aa2.4□□□□□ -2.03
UBP12YJL197W HSP150P32478 413 aa2.4□□□□□ -2.03
UBP12YJL197W YRF1-2P40105 1681 aa2.39□□□□□ -2.03
UBP12YJL197W MLP2P40457 1679 aa2.39□□□□□ -2.03
UBP12YJL197W USO1P25386 1790 aa2.39□□□□□ -2.03
UBP12YJL197W FLO9P39712 1322 aa2.39□□□□□ -2.03
UBP12YJL197W GTT1P40582 234 aa2.39□□□□□ -2.03
UBP12YJL197W FIT1Q04433 528 aa2.39□□□□□ -2.03
UBP12YJL197W CAT8P39113 1433 aa2.39□□□□□ -2.03
UBP12YJL197W AVO2Q04749 426 aa2.38□□□□□ -2.03
UBP12YJL197W TAR1Q8TGM6 124 aa2.38□□□□□ -2.03
UBP12YJL197W FAS1P07149 2051 aaKnown RBP2.38□□□□□ -2.03
UBP12YJL197W PRE1P22141 198 aaKnown RBP2.38□□□□□ -2.03
UBP12YJL197W YER187WP40102 141 aa2.38□□□□□ -2.03
UBP12YJL197W HPA2Q06592 156 aa2.38□□□□□ -2.03
UBP12YJL197W YOS1Q3E834 85 aa2.38□□□□□ -2.03
UBP12YJL197W STU1P38198 1513 aa2.38□□□□□ -2.03
UBP12YJL197W HUR1P45820 110 aa2.38□□□□□ -2.03
UBP12YJL197W MYO4P32492 1471 aa2.38□□□□□ -2.03
UBP12YJL197W GEA1P47102 1408 aaPredicted RBP2.38□□□□□ -2.03
UBP12YJL197W OST5Q92316 86 aa2.37□□□□□ -2.03
UBP12YJL197W GIS2P53849 153 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03 RIP-Chip
UBP12YJL197W MIC10Q96VH5 97 aa2.37□□□□□ -2.03
UBP12YJL197W LYS2P07702 1392 aa2.37□□□□□ -2.03
UBP12YJL197W SMC4Q12267 1418 aa2.37□□□□□ -2.03
UBP12YJL197W VTH1P40438 1549 aa2.37□□□□□ -2.03
UBP12YJL197W VTH2P40890 1549 aa2.37□□□□□ -2.03
UBP12YJL197W RPL40AP0CH08 128 aaKnown RBP2.37□□□□□ -2.03
UBP12YJL197W RPL40BP0CH09 128 aaKnown RBP2.37□□□□□ -2.03
UBP12YJL197W NRG2P38082 220 aa2.37□□□□□ -2.03
UBP12YJL197W PAU12P53343 120 aa2.37□□□□□ -2.03
UBP12YJL197W IML1P47170 1584 aa2.37□□□□□ -2.03
UBP12YJL197W YLR296WQ05898 108 aa2.36□□□□□ -2.03
UBP12YJL197W YLR162WQ06235 118 aa2.36□□□□□ -2.03
UBP12YJL197W UBC4P15731 148 aa2.36□□□□□ -2.03
UBP12YJL197W ATG8P38182 117 aaRIP-Chip data2.36□□□□□ -2.03not detected
UBP12YJL197W YCR075W-AQ3E830 75 aa2.36□□□□□ -2.03
UBP12YJL197W RTC6O14464 93 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms