RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W FLO10P36170 1169 aa2.09□□□□□ -2.07
TRA1YHR099W FYV4P38783 130 aaPredicted RBP2.09□□□□□ -2.07
TRA1YHR099W TAX4P47030 604 aa2.09□□□□□ -2.07
TRA1YHR099W YDR029WQ12111 104 aa2.09□□□□□ -2.07
TRA1YHR099W KSH1Q8TGJ3 72 aa2.09□□□□□ -2.07
TRA1YHR099W HPF1Q05164 967 aa2.09□□□□□ -2.08
TRA1YHR099W MATALPHA1P0CY06 175 aa2.09□□□□□ -2.08
TRA1YHR099W HMLALPHA1P0CY07 175 aa2.09□□□□□ -2.08
TRA1YHR099W GLN3P18494 730 aa2.09□□□□□ -2.08
TRA1YHR099W YER076CP40049 302 aa2.09□□□□□ -2.08
TRA1YHR099W PST1Q12355 444 aa2.09□□□□□ -2.08
TRA1YHR099W YMC1P32331 307 aa2.09□□□□□ -2.08
TRA1YHR099W MRPL39P36533 70 aa2.09□□□□□ -2.08
TRA1YHR099W RPL38P49167 78 aaKnown RBP2.09□□□□□ -2.08
TRA1YHR099W PRS5Q12265 496 aaKnown RBP2.09□□□□□ -2.08
TRA1YHR099W YCH1P42937 148 aa2.09□□□□□ -2.08
TRA1YHR099W YJR115WP47152 169 aa2.09□□□□□ -2.08
TRA1YHR099W YMR317WQ04893 1140 aa2.09□□□□□ -2.08
TRA1YHR099W VPS63O13549 108 aa2.08□□□□□ -2.08
TRA1YHR099W YPR170W-BP0C5R9 85 aa2.08□□□□□ -2.08
TRA1YHR099W MOT3P54785 490 aaKnown RBP2.08□□□□□ -2.08
TRA1YHR099W SDH6Q3E785 79 aa2.08□□□□□ -2.08
TRA1YHR099W CYR1P08678 2026 aaKnown RBP2.08□□□□□ -2.08
TRA1YHR099W QRI5P32344 111 aa2.08□□□□□ -2.08
TRA1YHR099W BET1P22804 142 aa2.08□□□□□ -2.08
TRA1YHR099W LST8P41318 303 aa2.08□□□□□ -2.08
TRA1YHR099W MRPL9P31334 269 aa2.08□□□□□ -2.08
TRA1YHR099W HED1Q03937 162 aa2.08□□□□□ -2.08
TRA1YHR099W TAH1P25638 111 aaPredicted RBP2.08□□□□□ -2.08
TRA1YHR099W CUP2P15315 225 aa2.08□□□□□ -2.08
TRA1YHR099W ZRT3P34240 503 aa2.08□□□□□ -2.08
TRA1YHR099W DCW1P36091 449 aa2.08□□□□□ -2.08
TRA1YHR099W YGR269WP40326 108 aa2.08□□□□□ -2.08
TRA1YHR099W VMA9Q3E7B6 73 aa2.08□□□□□ -2.08
TRA1YHR099W RPS28BP0C0X0 67 aaKnown RBP2.08□□□□□ -2.08
TRA1YHR099W BNS1P50084 137 aa2.08□□□□□ -2.08
TRA1YHR099W RPS28AQ3E7X9 67 aaPredicted RBP2.08□□□□□ -2.08
TRA1YHR099W PEX4P29340 183 aa2.08□□□□□ -2.08
TRA1YHR099W AIM4P38305 123 aaPredicted RBP2.08□□□□□ -2.08
TRA1YHR099W HTD2P38790 280 aaKnown RBP2.08□□□□□ -2.08
TRA1YHR099W CIS3P47001 227 aa2.08□□□□□ -2.08
TRA1YHR099W YIL134C-AQ45U18 67 aa2.08□□□□□ -2.08
TRA1YHR099W CTP1P38152 299 aa2.07□□□□□ -2.08
TRA1YHR099W POR2P40478 281 aa2.07□□□□□ -2.08
TRA1YHR099W YJR120WP47157 116 aa2.07□□□□□ -2.08
TRA1YHR099W PIS1P06197 220 aaKnown RBP2.07□□□□□ -2.08
TRA1YHR099W VHS2P40463 436 aa2.07□□□□□ -2.08
TRA1YHR099W YGR050CP53231 118 aa2.07□□□□□ -2.08
TRA1YHR099W FHN1P53279 174 aa2.07□□□□□ -2.08
TRA1YHR099W DFG5Q05031 458 aa2.07□□□□□ -2.08
TRA1YHR099W YPR071WQ12346 211 aa2.07□□□□□ -2.08
TRA1YHR099W YML054C-AQ3E809 52 aa2.07□□□□□ -2.08
TRA1YHR099W YJR107C-AP0CT86 78 aa2.07□□□□□ -2.08
TRA1YHR099W YNL194CP40169 301 aa2.07□□□□□ -2.08
TRA1YHR099W YMR007WQ03675 126 aa2.07□□□□□ -2.08
TRA1YHR099W YLR042CQ07990 161 aa2.07□□□□□ -2.08
TRA1YHR099W HAA1Q12753 694 aaKnown RBP2.07□□□□□ -2.08
TRA1YHR099W YKL023C-AQ2V2P3 75 aa2.07□□□□□ -2.08
TRA1YHR099W YLL053CP0CD98 152 aa2.07□□□□□ -2.08
TRA1YHR099W ZAP1P47043 880 aa2.07□□□□□ -2.08
TRA1YHR099W PIR1Q03178 341 aa2.07□□□□□ -2.08
TRA1YHR099W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
TRA1YHR099W LDB16P25587 256 aa2.07□□□□□ -2.08
TRA1YHR099W MRPL6P32904 214 aa2.07□□□□□ -2.08
TRA1YHR099W YPR064WQ12492 139 aa2.07□□□□□ -2.08
TRA1YHR099W YMR175W-AQ3E766 64 aa2.07□□□□□ -2.08
TRA1YHR099W YKR032WP36127 104 aa2.06□□□□□ -2.08
TRA1YHR099W YJL118WP47022 219 aa2.06□□□□□ -2.08
TRA1YHR099W CYT2Q00873 224 aa2.06□□□□□ -2.08
TRA1YHR099W AIM34Q03673 198 aa2.06□□□□□ -2.08
TRA1YHR099W YCR095W-AQ3E787 52 aa2.06□□□□□ -2.08
TRA1YHR099W YAR023CD6VPM8 179 aa2.06□□□□□ -2.08
TRA1YHR099W AGA1P32323 725 aa2.06□□□□□ -2.08
TRA1YHR099W ANS1P38832 159 aa2.06□□□□□ -2.08
TRA1YHR099W YPR053CQ6Q5F3 151 aa2.06□□□□□ -2.08
TRA1YHR099W FIG2P25653 1609 aa2.06□□□□□ -2.08
TRA1YHR099W YDR524C-BQ3E6R4 66 aa2.06□□□□□ -2.08
TRA1YHR099W ATO3Q12359 275 aa2.06□□□□□ -2.08
TRA1YHR099W YNL165WP53891 406 aa2.06□□□□□ -2.08
TRA1YHR099W YNL046WP53956 172 aa2.06□□□□□ -2.08
TRA1YHR099W BSC1Q12140 328 aa2.06□□□□□ -2.08
TRA1YHR099W TIM22Q12328 207 aa2.06□□□□□ -2.08
TRA1YHR099W YKL065W-AQ2V2P2 73 aa2.06□□□□□ -2.08
TRA1YHR099W RPL33AP05744 107 aaKnown RBP2.06□□□□□ -2.08
TRA1YHR099W BSC4P53841 131 aa2.06□□□□□ -2.08
TRA1YHR099W TDA7P53882 636 aaPredicted RBP2.06□□□□□ -2.08
TRA1YHR099W SMX3P54999 86 aaPredicted RBP2.06□□□□□ -2.08
TRA1YHR099W SRL1Q08673 210 aa2.06□□□□□ -2.08
TRA1YHR099W PTR3P43606 678 aa2.06□□□□□ -2.08
TRA1YHR099W STT4P37297 1900 aa2.06□□□□□ -2.08
TRA1YHR099W YBL039W-BP0C268 59 aa2.05□□□□□ -2.08
TRA1YHR099W ULI1P43604 169 aa2.05□□□□□ -2.08
TRA1YHR099W LAA1P39526 2014 aa2.05□□□□□ -2.08
TRA1YHR099W NRG2P38082 220 aa2.05□□□□□ -2.08
TRA1YHR099W YDR119W-AQ2V2P9 66 aa2.05□□□□□ -2.08
TRA1YHR099W YFR057WP43625 151 aa2.05□□□□□ -2.08
TRA1YHR099W RPL23AP0CX41 137 aaKnown RBP2.05□□□□□ -2.08
TRA1YHR099W RPL23BP0CX42 137 aaKnown RBP2.05□□□□□ -2.08
TRA1YHR099W GLE2P40066 365 aa2.05□□□□□ -2.08
TRA1YHR099W YOL097W-AQ3E7Y9 61 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms