RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YKR032WP36127 104 aa2.99□□□□□ -1.93
SPT6YGR116W YCR006CP25350 157 aa2.99□□□□□ -1.93
SPT6YGR116W YMR141CP40211 102 aa2.99□□□□□ -1.93
SPT6YGR116W SIP18P50263 79 aa2.99□□□□□ -1.93
SPT6YGR116W YER084WP40057 128 aa2.99□□□□□ -1.93
SPT6YGR116W LTP1P40347 161 aa2.99□□□□□ -1.93
SPT6YGR116W COF1Q03048 143 aaKnown RBP2.99□□□□□ -1.93
SPT6YGR116W DFM1Q12743 341 aaKnown RBP2.99□□□□□ -1.93
SPT6YGR116W BLM10P43583 2143 aa2.98□□□□□ -1.93
SPT6YGR116W SKI6P46948 246 aaPredicted RBP2.98□□□□□ -1.93
SPT6YGR116W CCW14O13547 238 aa2.98□□□□□ -1.93
SPT6YGR116W CWP2P43497 92 aa2.98□□□□□ -1.93
SPT6YGR116W PIR5P46999 287 aa2.98□□□□□ -1.93
SPT6YGR116W YAL063C-AQ3E791 96 aa2.98□□□□□ -1.93
SPT6YGR116W YIL059CP40520 121 aa2.98□□□□□ -1.93
SPT6YGR116W FIP1P45976 327 aa2.98□□□□□ -1.93
SPT6YGR116W MSA1Q08471 629 aa2.98□□□□□ -1.93
SPT6YGR116W COA3Q3E7B2 85 aa2.98□□□□□ -1.93
SPT6YGR116W YOR008C-AQ3E7B9 74 aa2.98□□□□□ -1.93
SPT6YGR116W STF1P01098 86 aa2.98□□□□□ -1.93
SPT6YGR116W YKL097CP34245 136 aa2.98□□□□□ -1.93
SPT6YGR116W CAX4P53223 239 aa2.98□□□□□ -1.93
SPT6YGR116W YTH1Q06102 208 aaPredicted RBP2.98□□□□□ -1.93
SPT6YGR116W RRG8Q06109 277 aa2.98□□□□□ -1.93
SPT6YGR116W ENV10Q99382 181 aa2.98□□□□□ -1.93
SPT6YGR116W RPL42AP0CX27 106 aaKnown RBP2.97□□□□□ -1.93
SPT6YGR116W RPL42BP0CX28 106 aaKnown RBP2.97□□□□□ -1.93
SPT6YGR116W KTI12P34253 313 aaKnown RBP2.97□□□□□ -1.93
SPT6YGR116W YDR114CQ04597 100 aa2.97□□□□□ -1.93
SPT6YGR116W RXT3Q07458 294 aa2.97□□□□□ -1.93
SPT6YGR116W YHR213WP0CI67 198 aa2.97□□□□□ -1.93
SPT6YGR116W SPI1P40092 148 aa2.97□□□□□ -1.93
SPT6YGR116W YFL051CP43552 160 aa2.97□□□□□ -1.93
SPT6YGR116W YFR057WP43625 151 aa2.97□□□□□ -1.93
SPT6YGR116W RNH203Q12338 110 aa2.97□□□□□ -1.93
SPT6YGR116W DSE2P38844 325 aa2.97□□□□□ -1.93
SPT6YGR116W YER085CP40058 173 aa2.97□□□□□ -1.93
SPT6YGR116W VHS2P40463 436 aa2.97□□□□□ -1.93
SPT6YGR116W MRPL49P40858 161 aaPredicted RBP2.97□□□□□ -1.93
SPT6YGR116W COX12Q01519 83 aa2.97□□□□□ -1.93
SPT6YGR116W ECM12O13529 151 aa2.96□□□□□ -1.93
SPT6YGR116W Q0255P03881 472 aa2.96□□□□□ -1.93
SPT6YGR116W RPS23AP0CX29 145 aaKnown RBP2.96□□□□□ -1.93
SPT6YGR116W RPS23BP0CX30 145 aa2.96□□□□□ -1.93
SPT6YGR116W GLO1P50107 326 aa2.96□□□□□ -1.93
SPT6YGR116W AIM11P87275 137 aa2.96□□□□□ -1.93
SPT6YGR116W YIL046W-AQ3E7Z4 54 aa2.96□□□□□ -1.93
SPT6YGR116W POL2P21951 2222 aaKnown RBP2.96□□□□□ -1.94
SPT6YGR116W RPS26AP39938 119 aaKnown RBP2.96□□□□□ -1.94
SPT6YGR116W PEX17P40155 199 aa2.96□□□□□ -1.94
SPT6YGR116W LCB3P47013 409 aa2.96□□□□□ -1.94
SPT6YGR116W YNR077CP53758 84 aa2.96□□□□□ -1.94
SPT6YGR116W VMA11P32842 164 aa2.96□□□□□ -1.94
SPT6YGR116W MOT3P54785 490 aaKnown RBP2.96□□□□□ -1.94
SPT6YGR116W CYR1P08678 2026 aaKnown RBP2.96□□□□□ -1.94
SPT6YGR116W RPS8AP0CX39 200 aaKnown RBP2.96□□□□□ -1.94
SPT6YGR116W RPS8BP0CX40 200 aaKnown RBP2.96□□□□□ -1.94
SPT6YGR116W RPB10P22139 70 aa2.96□□□□□ -1.94
SPT6YGR116W YHL042WP38729 150 aa2.95□□□□□ -1.94
SPT6YGR116W YDR209CQ03480 137 aa2.95□□□□□ -1.94
SPT6YGR116W ERF2Q06551 359 aa2.95□□□□□ -1.94
SPT6YGR116W PHO85P17157 305 aa2.95□□□□□ -1.94
SPT6YGR116W LDB16P25587 256 aa2.95□□□□□ -1.94
SPT6YGR116W YBL112CQ3E7Y4 105 aa2.95□□□□□ -1.94
SPT6YGR116W NRG2P38082 220 aa2.95□□□□□ -1.94
SPT6YGR116W YDR029WQ12111 104 aa2.95□□□□□ -1.94
SPT6YGR116W MRPL23Q12487 163 aaPredicted RBP2.95□□□□□ -1.94
SPT6YGR116W AGA1P32323 725 aa2.94□□□□□ -1.94
SPT6YGR116W YIA6P40556 373 aa2.94□□□□□ -1.94
SPT6YGR116W IMP2P46972 177 aa2.94□□□□□ -1.94
SPT6YGR116W EMC6Q12431 108 aa2.94□□□□□ -1.94
SPT6YGR116W FAS1P07149 2051 aaKnown RBP2.94□□□□□ -1.94
SPT6YGR116W YHR139C-AO13536 103 aa2.94□□□□□ -1.94
SPT6YGR116W PBI2P0CT04 75 aaKnown RBP2.94□□□□□ -1.94
SPT6YGR116W INO2P26798 304 aa2.94□□□□□ -1.94
SPT6YGR116W MTC6P38849 526 aa2.94□□□□□ -1.94
SPT6YGR116W AIM34Q03673 198 aa2.94□□□□□ -1.94
SPT6YGR116W PBA1Q05778 276 aa2.94□□□□□ -1.94
SPT6YGR116W YPL229WQ99395 206 aa2.94□□□□□ -1.94
SPT6YGR116W MRPL38P35996 138 aaPredicted RBP2.93□□□□□ -1.94
SPT6YGR116W YEL067CP39978 195 aa2.93□□□□□ -1.94
SPT6YGR116W KEG1P43614 200 aa2.93□□□□□ -1.94
SPT6YGR116W RPL28P02406 149 aaKnown RBP2.93□□□□□ -1.94
SPT6YGR116W RPL18AP0CX49 186 aaKnown RBP2.93□□□□□ -1.94
SPT6YGR116W RPL18BP0CX50 186 aaKnown RBP2.93□□□□□ -1.94
SPT6YGR116W MID2P36027 376 aa2.93□□□□□ -1.94
SPT6YGR116W MIC12P38341 106 aa2.93□□□□□ -1.94
SPT6YGR116W AIM19P40502 157 aa2.93□□□□□ -1.94
SPT6YGR116W KNH1P50112 268 aa2.93□□□□□ -1.94
SPT6YGR116W SBH2P52871 88 aa2.93□□□□□ -1.94
SPT6YGR116W YDL009CQ12210 107 aa2.93□□□□□ -1.94
SPT6YGR116W YDR119W-AQ2V2P9 66 aa2.93□□□□□ -1.94
SPT6YGR116W YMR105W-AQ8TGS8 64 aa2.93□□□□□ -1.94
SPT6YGR116W YLR415CO13578 112 aa2.93□□□□□ -1.94
SPT6YGR116W RPL39P04650 51 aa2.93□□□□□ -1.94
SPT6YGR116W TOM6P33448 61 aa2.93□□□□□ -1.94
SPT6YGR116W POR2P40478 281 aa2.93□□□□□ -1.94
SPT6YGR116W YGR219WP53307 113 aa2.93□□□□□ -1.94
SPT6YGR116W ATP15P21306 62 aa2.92□□□□□ -1.94
SPT6YGR116W VTC1P40046 129 aaRIP-Chip data2.92□□□□□ -1.94not detected
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms