RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W BMH2P34730 273 aaKnown RBP-0.41□□□□□ -2.48
CSE1YGL238W MRPL38P35996 138 aaPredicted RBP-0.41□□□□□ -2.48
CSE1YGL238W GPI2P46961 280 aa-0.41□□□□□ -2.48
CSE1YGL238W YGR164WP53291 111 aa-0.41□□□□□ -2.48
CSE1YGL238W RRP17Q04031 235 aaPredicted RBP-0.41□□□□□ -2.48
CSE1YGL238W ATG38Q05789 226 aaKnown RBP-0.41□□□□□ -2.48
CSE1YGL238W MHF2Q3E829 80 aa-0.41□□□□□ -2.48
CSE1YGL238W RPL25P04456 142 aaKnown RBP-0.42□□□□□ -2.48
CSE1YGL238W MRP49P32388 137 aa-0.42□□□□□ -2.48
CSE1YGL238W CCS1P40202 249 aaKnown RBP-0.42□□□□□ -2.48
CSE1YGL238W RPC10P40422 70 aa-0.42□□□□□ -2.48
CSE1YGL238W GLC8P41818 229 aa-0.42□□□□□ -2.48
CSE1YGL238W NSE4P43124 402 aa-0.42□□□□□ -2.48
CSE1YGL238W DIE2P50076 525 aa-0.42□□□□□ -2.48
CSE1YGL238W ORM1P53224 222 aa-0.42□□□□□ -2.48
CSE1YGL238W RRT15Q3E811 62 aa-0.42□□□□□ -2.48
CSE1YGL238W YMR122W-AQ3E842 84 aa-0.42□□□□□ -2.48
CSE1YGL238W STF1P01098 86 aa-0.42□□□□□ -2.48
CSE1YGL238W RPL24AP04449 155 aaKnown RBP-0.42□□□□□ -2.48
CSE1YGL238W CSH1P38287 376 aa-0.42□□□□□ -2.48
CSE1YGL238W YET3Q07451 203 aa-0.42□□□□□ -2.48
CSE1YGL238W FCY1Q12178 158 aa-0.42□□□□□ -2.48
CSE1YGL238W SPI1P40092 148 aa-0.43□□□□□ -2.48
CSE1YGL238W SNA2P56508 79 aa-0.43□□□□□ -2.48
CSE1YGL238W THI74Q04083 370 aa-0.43□□□□□ -2.48
CSE1YGL238W ATG41Q12048 136 aa-0.43□□□□□ -2.48
CSE1YGL238W DAS2Q12084 232 aa-0.43□□□□□ -2.48
CSE1YGL238W MER1P16523 270 aa-0.43□□□□□ -2.48
CSE1YGL238W MAG1P22134 296 aaKnown RBP-0.43□□□□□ -2.48
CSE1YGL238W YCR023CP25351 611 aa-0.43□□□□□ -2.48
CSE1YGL238W PAM17P36147 197 aa-0.43□□□□□ -2.48
CSE1YGL238W SLM6P38343 150 aa-0.43□□□□□ -2.48
CSE1YGL238W GPI14P47088 403 aaKnown RBP-0.43□□□□□ -2.48
CSE1YGL238W YNL190WP53872 204 aa-0.43□□□□□ -2.48
CSE1YGL238W LSM7P53905 115 aaKnown RBP-0.43□□□□□ -2.48
CSE1YGL238W YOR381W-AQ3E804 55 aa-0.43□□□□□ -2.48
CSE1YGL238W GSP2P32836 220 aaKnown RBP-0.43□□□□□ -2.48
CSE1YGL238W RTC3P38804 111 aaPredicted RBP-0.43□□□□□ -2.48
CSE1YGL238W RTC4P53850 401 aa-0.43□□□□□ -2.48
CSE1YGL238W HNT1Q04344 158 aaKnown RBP-0.43□□□□□ -2.48
CSE1YGL238W YMR253CQ04835 414 aa-0.43□□□□□ -2.48
CSE1YGL238W DYN3Q04949 312 aa-0.43□□□□□ -2.48
CSE1YGL238W ATP20Q12233 115 aa-0.43□□□□□ -2.48
CSE1YGL238W YCL012CQ8J0M4 134 aa-0.43□□□□□ -2.48
CSE1YGL238W DDP1Q99321 188 aaKnown RBP-0.43□□□□□ -2.48
CSE1YGL238W SNF4P12904 322 aa-0.44□□□□□ -2.48
CSE1YGL238W FUN14P18411 198 aa-0.44□□□□□ -2.48
CSE1YGL238W YMR31P19955 123 aa-0.44□□□□□ -2.48
CSE1YGL238W MVB12P42939 101 aa-0.44□□□□□ -2.48
CSE1YGL238W SER2P42941 309 aa-0.44□□□□□ -2.48
CSE1YGL238W BXI1P48558 297 aa-0.44□□□□□ -2.48
CSE1YGL238W EDC1P53080 175 aaPredicted RBP-0.44□□□□□ -2.48
CSE1YGL238W BRP1P53194 125 aa-0.44□□□□□ -2.48
CSE1YGL238W YDR042CQ03205 200 aa-0.44□□□□□ -2.48
CSE1YGL238W YDR476CQ03362 224 aa-0.44□□□□□ -2.48
CSE1YGL238W DML1Q03652 475 aa-0.44□□□□□ -2.48
CSE1YGL238W NOC4Q06512 552 aaPredicted RBP-0.44□□□□□ -2.48
CSE1YGL238W YPD1Q07688 167 aa-0.44□□□□□ -2.48
CSE1YGL238W RUD3Q12234 484 aaKnown RBP-0.44□□□□□ -2.48
CSE1YGL238W MATALPHA2P0CY08 210 aa-0.44□□□□□ -2.48
CSE1YGL238W HMLALPHA2P0CY09 210 aa-0.44□□□□□ -2.48
CSE1YGL238W YPK2P18961 677 aa-0.44□□□□□ -2.48
CSE1YGL238W PMP3P87284 55 aa-0.44□□□□□ -2.48
CSE1YGL238W YDR366CP87287 132 aa-0.44□□□□□ -2.48
CSE1YGL238W GRX5Q02784 150 aa-0.44□□□□□ -2.48
CSE1YGL238W YMR099CQ03161 297 aaKnown RBP-0.44□□□□□ -2.48
CSE1YGL238W SHH3Q04487 196 aa-0.44□□□□□ -2.48
CSE1YGL238W SMD2Q06217 110 aaKnown RBP-0.44□□□□□ -2.48
CSE1YGL238W RRT8Q08219 342 aa-0.44□□□□□ -2.48
CSE1YGL238W YDL157CQ12082 118 aa-0.44□□□□□ -2.48
CSE1YGL238W YOR192C-CQ3E736 78 aa-0.44□□□□□ -2.48
CSE1YGL238W Q0032Q9ZZX7 96 aa-0.44□□□□□ -2.48
CSE1YGL238W PRE1P22141 198 aaKnown RBP-0.45□□□□□ -2.48
CSE1YGL238W YCR101CP25607 182 aa-0.45□□□□□ -2.48
CSE1YGL238W PPA2P28239 310 aa-0.45□□□□□ -2.48
CSE1YGL238W UTP11P34247 250 aaPredicted RBP-0.45□□□□□ -2.48
CSE1YGL238W YAR029WP39549 74 aa-0.45□□□□□ -2.48
CSE1YGL238W AIM2P39721 246 aa-0.45□□□□□ -2.48
CSE1YGL238W PAC10P48363 199 aa-0.45□□□□□ -2.48
CSE1YGL238W AIM34Q03673 198 aa-0.45□□□□□ -2.48
CSE1YGL238W PAM18Q07914 168 aa-0.45□□□□□ -2.48
CSE1YGL238W YOR034C-AQ3E735 80 aa-0.45□□□□□ -2.48
CSE1YGL238W YMR175W-AQ3E766 64 aa-0.45□□□□□ -2.48
CSE1YGL238W YIL002W-AQ3E7Z5 69 aa-0.45□□□□□ -2.48
CSE1YGL238W VMA6P32366 345 aaKnown RBP-0.45□□□□□ -2.48
CSE1YGL238W YIL163CP40448 117 aa-0.45□□□□□ -2.48
CSE1YGL238W POG1P40473 351 aa-0.45□□□□□ -2.48
CSE1YGL238W PDR17P53844 350 aa-0.45□□□□□ -2.48
CSE1YGL238W MPD1Q12404 318 aaKnown RBP-0.45□□□□□ -2.48
CSE1YGL238W THP2O13539 261 aaKnown RBP-0.46□□□□□ -2.48
CSE1YGL238W YGL041W-AP0C5N3 154 aa-0.46□□□□□ -2.48
CSE1YGL238W CBF1P17106 351 aa-0.46□□□□□ -2.48
CSE1YGL238W TRX3P25372 127 aa-0.46□□□□□ -2.48
CSE1YGL238W HSP30P25619 332 aa-0.46□□□□□ -2.48
CSE1YGL238W YKR041WP36134 250 aa-0.46□□□□□ -2.48
CSE1YGL238W SPC25P40014 221 aa-0.46□□□□□ -2.48
CSE1YGL238W SPC3Q12133 184 aa-0.46□□□□□ -2.48
CSE1YGL238W YKL023C-AQ2V2P3 75 aa-0.46□□□□□ -2.48
CSE1YGL238W YMR030W-AQ3E760 96 aa-0.46□□□□□ -2.48
CSE1YGL238W STE18P18852 110 aa-0.46□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms