RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YPR145C-AQ2V2P0 78 aa4.24□□□□□ -1.73
SHM1YBR263W PCC1Q3E833 88 aa4.24□□□□□ -1.73
SHM1YBR263W MRPL20P22354 195 aaPredicted RBP4.24□□□□□ -1.73
SHM1YBR263W YER135CP40082 130 aa4.24□□□□□ -1.73
SHM1YBR263W YMR141CP40211 102 aa4.24□□□□□ -1.73
SHM1YBR263W YCH1P42937 148 aa4.24□□□□□ -1.73
SHM1YBR263W YMR244WQ04018 355 aa4.24□□□□□ -1.73
SHM1YBR263W SRP21P32342 167 aa4.23□□□□□ -1.73
SHM1YBR263W YBR090CP38253 122 aa4.23□□□□□ -1.73
SHM1YBR263W MIG3P39943 394 aa4.23□□□□□ -1.73
SHM1YBR263W GET2P40056 285 aa4.23□□□□□ -1.73
SHM1YBR263W APS2Q00381 147 aa4.23□□□□□ -1.73
SHM1YBR263W YPL162CQ12042 273 aa4.23□□□□□ -1.73
SHM1YBR263W ERG27Q12452 347 aaKnown RBP4.23□□□□□ -1.73
SHM1YBR263W PCL2P25693 308 aa4.22□□□□□ -1.73
SHM1YBR263W YPT10P38146 199 aa4.22□□□□□ -1.73
SHM1YBR263W SPI1P40092 148 aa4.22□□□□□ -1.73
SHM1YBR263W DAD4P69851 72 aa4.22□□□□□ -1.73
SHM1YBR263W MRPS8Q03799 155 aa4.22□□□□□ -1.73
SHM1YBR263W STP4Q07351 490 aa4.22□□□□□ -1.73
SHM1YBR263W CCW12Q12127 133 aa4.22□□□□□ -1.73
SHM1YBR263W ARO2P28777 376 aaKnown RBP4.21□□□□□ -1.74
SHM1YBR263W AUA1P32450 94 aa4.21□□□□□ -1.74
SHM1YBR263W NTF2P33331 125 aaKnown RBP4.21□□□□□ -1.74
SHM1YBR263W YHR022CP38763 256 aa4.21□□□□□ -1.74
SHM1YBR263W GLC8P41818 229 aa4.21□□□□□ -1.74
SHM1YBR263W DAD3P69850 94 aa4.21□□□□□ -1.74
SHM1YBR263W ATP19P81451 68 aa4.21□□□□□ -1.74
SHM1YBR263W NAT3Q06504 195 aa4.21□□□□□ -1.74
SHM1YBR263W FMP49A0A023PZB3 126 aa4.2□□□□□ -1.74
SHM1YBR263W SAL1D6W196 494 aa4.2□□□□□ -1.74
SHM1YBR263W ADH3P07246 375 aaKnown RBP4.2□□□□□ -1.74
SHM1YBR263W ATP5P09457 212 aa4.2□□□□□ -1.74
SHM1YBR263W FZF1P32805 299 aa4.2□□□□□ -1.74
SHM1YBR263W SSS1P35179 80 aa4.2□□□□□ -1.74
SHM1YBR263W NRG2P38082 220 aa4.2□□□□□ -1.74
SHM1YBR263W MRPS9P38120 278 aa4.2□□□□□ -1.74
SHM1YBR263W ABF2Q02486 183 aa4.2□□□□□ -1.74
SHM1YBR263W ELC1Q03071 99 aa4.2□□□□□ -1.74
SHM1YBR263W YKL183C-AQ3E765 70 aa4.2□□□□□ -1.74
SHM1YBR263W YDL085C-AQ3E7B7 68 aaKnown RBP4.2□□□□□ -1.74
SHM1YBR263W YOL085CQ99345 113 aa4.2□□□□□ -1.74
SHM1YBR263W TIR1P10863 254 aa4.19□□□□□ -1.74
SHM1YBR263W CPT1P17898 393 aa4.19□□□□□ -1.74
SHM1YBR263W FUN14P18411 198 aa4.19□□□□□ -1.74
SHM1YBR263W YFR035CP43608 114 aa4.19□□□□□ -1.74
SHM1YBR263W YDR366CP87287 132 aa4.19□□□□□ -1.74
SHM1YBR263W COX12Q01519 83 aa4.19□□□□□ -1.74
SHM1YBR263W DAD1Q12248 94 aa4.19□□□□□ -1.74
SHM1YBR263W YCR075W-AQ3E830 75 aa4.19□□□□□ -1.74
SHM1YBR263W ATG8P38182 117 aaRIP-Chip data4.18□□□□□ -1.74not detected
SHM1YBR263W YOR105WQ08504 108 aa4.18□□□□□ -1.74
SHM1YBR263W SMT3Q12306 101 aaKnown RBP4.18□□□□□ -1.74
SHM1YBR263W YLR118CQ12354 227 aa4.18□□□□□ -1.74
SHM1YBR263W YLR342W-AQ3E810 57 aa4.18□□□□□ -1.74
SHM1YBR263W VAR1P02381 398 aa4.18□□□□□ -1.74
SHM1YBR263W QRI5P32344 111 aa4.18□□□□□ -1.74
SHM1YBR263W YRA2P36036 203 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
SHM1YBR263W VMA21P41806 77 aa4.18□□□□□ -1.74
SHM1YBR263W YFR045WP43617 309 aa4.18□□□□□ -1.74
SHM1YBR263W YFR057WP43625 151 aa4.18□□□□□ -1.74
SHM1YBR263W CNL1Q06333 122 aa4.18□□□□□ -1.74
SHM1YBR263W HSP10P38910 106 aa4.17□□□□□ -1.74
SHM1YBR263W DAN1P47178 298 aa4.17□□□□□ -1.74
SHM1YBR263W SCW10Q04951 389 aa4.17□□□□□ -1.74
SHM1YBR263W RDS3Q06835 107 aaPredicted RBP4.17□□□□□ -1.74
SHM1YBR263W UTP23Q12339 254 aaKnown RBP4.17□□□□□ -1.74
SHM1YBR263W RPL2AP0CX45 254 aaKnown RBP4.16□□□□□ -1.74
SHM1YBR263W RPL2BP0CX46 254 aaKnown RBP4.16□□□□□ -1.74
SHM1YBR263W RPS11AP0CX47 156 aaKnown RBP4.16□□□□□ -1.74
SHM1YBR263W RPS11BP0CX48 156 aaKnown RBP4.16□□□□□ -1.74
SHM1YBR263W HAP3P13434 144 aa4.16□□□□□ -1.74
SHM1YBR263W MRPL31P14063 131 aaPredicted RBP4.16□□□□□ -1.74
SHM1YBR263W PAU15P40585 124 aa4.16□□□□□ -1.74
SHM1YBR263W YGL010WP25338 174 aa4.15□□□□□ -1.75
SHM1YBR263W MIX23P38162 196 aa4.15□□□□□ -1.75
SHM1YBR263W VHS2P40463 436 aa4.15□□□□□ -1.75
SHM1YBR263W MGA1P53050 456 aa4.15□□□□□ -1.75
SHM1YBR263W TIM22Q12328 207 aa4.15□□□□□ -1.75
SHM1YBR263W RPL12AP0CX53 165 aaKnown RBP4.14□□□□□ -1.75
SHM1YBR263W RPL12BP0CX54 165 aa4.14□□□□□ -1.75
SHM1YBR263W AGA1P32323 725 aa4.14□□□□□ -1.75
SHM1YBR263W MRP49P32388 137 aa4.14□□□□□ -1.75
SHM1YBR263W UPS3Q04006 179 aa4.14□□□□□ -1.75
SHM1YBR263W SEN15Q04675 128 aa4.14□□□□□ -1.75
SHM1YBR263W YNR034W-AQ3E841 98 aa4.14□□□□□ -1.75
SHM1YBR263W COA6Q3E846 104 aa4.14□□□□□ -1.75
SHM1YBR263W Q0255P03881 472 aa4.13□□□□□ -1.75
SHM1YBR263W HMRA1P0CY11 126 aa4.13□□□□□ -1.75
SHM1YBR263W PAM17P36147 197 aa4.13□□□□□ -1.75
SHM1YBR263W RPB11P38902 120 aa4.13□□□□□ -1.75
SHM1YBR263W YER076CP40049 302 aa4.13□□□□□ -1.75
SHM1YBR263W KEG1P43614 200 aa4.13□□□□□ -1.75
SHM1YBR263W CUE4Q04201 117 aaPredicted RBP4.13□□□□□ -1.75
SHM1YBR263W YLR050CQ12155 161 aaKnown RBP4.13□□□□□ -1.75
SHM1YBR263W YBR200W-AQ3E755 54 aa4.13□□□□□ -1.75
SHM1YBR263W RPS8AP0CX39 200 aaKnown RBP4.12□□□□□ -1.75
SHM1YBR263W RPS8BP0CX40 200 aaKnown RBP4.12□□□□□ -1.75
SHM1YBR263W YCR001WP25347 104 aa4.12□□□□□ -1.75
SHM1YBR263W PAU5P43575 122 aa4.12□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 71 ms