RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W RPA12P32529 125 aaKnown RBP5.78□□□□□ -1.48
TOD6YBL054W YHR140WP38842 239 aa5.78□□□□□ -1.48
TOD6YBL054W YFR057WP43625 151 aa5.78□□□□□ -1.48
TOD6YBL054W IMP2P46972 177 aa5.78□□□□□ -1.48
TOD6YBL054W ATP23P53722 227 aa5.78□□□□□ -1.48
TOD6YBL054W YNR077CP53758 84 aa5.78□□□□□ -1.48
TOD6YBL054W NUP53Q03790 475 aa5.78□□□□□ -1.48
TOD6YBL054W LSM6Q06406 86 aaKnown RBP5.78□□□□□ -1.48
TOD6YBL054W RXT3Q07458 294 aa5.78□□□□□ -1.48
TOD6YBL054W RRT1P38192 103 aa5.77□□□□□ -1.49
TOD6YBL054W YIP1P53039 248 aa5.77□□□□□ -1.49
TOD6YBL054W YIP3P53633 176 aa5.77□□□□□ -1.49
TOD6YBL054W YOR029WQ12243 111 aa5.77□□□□□ -1.49
TOD6YBL054W TAO3P40468 2376 aa5.77□□□□□ -1.49
TOD6YBL054W COA3Q3E7B2 85 aa5.76□□□□□ -1.49
TOD6YBL054W YDL022C-AP0C5L6 82 aa5.76□□□□□ -1.49
TOD6YBL054W TOA2P32774 122 aa5.76□□□□□ -1.49
TOD6YBL054W YNL217WP40152 326 aa5.76□□□□□ -1.49
TOD6YBL054W YDR209CQ03480 137 aa5.76□□□□□ -1.49
TOD6YBL054W YPL229WQ99395 206 aa5.76□□□□□ -1.49
TOD6YBL054W RPL39P04650 51 aa5.75□□□□□ -1.49
TOD6YBL054W RPS26AP39938 119 aaKnown RBP5.75□□□□□ -1.49
TOD6YBL054W TOS6P48560 102 aa5.75□□□□□ -1.49
TOD6YBL054W YMR105W-AQ8TGS8 64 aa5.75□□□□□ -1.49
TOD6YBL054W YKR045CP36138 183 aa5.74□□□□□ -1.49
TOD6YBL054W TIM22Q12328 207 aa5.74□□□□□ -1.49
TOD6YBL054W YIR021W-AQ3E739 70 aa5.74□□□□□ -1.49
TOD6YBL054W IGO2Q9P305 131 aa5.74□□□□□ -1.49
TOD6YBL054W RPS23AP0CX29 145 aaKnown RBP5.73□□□□□ -1.49
TOD6YBL054W RPS23BP0CX30 145 aa5.73□□□□□ -1.49
TOD6YBL054W KRE1P17260 313 aa5.73□□□□□ -1.49
TOD6YBL054W VTC1P40046 129 aaRIP-Chip data5.73□□□□□ -1.49not detected
TOD6YBL054W YMR181CQ03231 154 aa5.73□□□□□ -1.49
TOD6YBL054W AIR2Q12476 344 aaKnown RBP5.73□□□□□ -1.49
TOD6YBL054W PHO85P17157 305 aa5.72□□□□□ -1.49
TOD6YBL054W GLE2P40066 365 aa5.72□□□□□ -1.49
TOD6YBL054W YJL027CP47063 138 aaPredicted RBP5.72□□□□□ -1.49
TOD6YBL054W YTH1Q06102 208 aaPredicted RBP5.72□□□□□ -1.49
TOD6YBL054W GAT3Q07928 141 aa5.72□□□□□ -1.49
TOD6YBL054W YAL063C-AQ3E791 96 aa5.72□□□□□ -1.49
TOD6YBL054W AGA1P32323 725 aa5.72□□□□□ -1.49
TOD6YBL054W KTI12P34253 313 aaKnown RBP5.72□□□□□ -1.49
TOD6YBL054W VHS2P40463 436 aa5.72□□□□□ -1.49
TOD6YBL054W AIM11P87275 137 aa5.72□□□□□ -1.49
TOD6YBL054W SEN1Q00416 2231 aaKnown RBP5.71□□□□□ -1.5
TOD6YBL054W SPI1P40092 148 aa5.71□□□□□ -1.5
TOD6YBL054W YER085CP40058 173 aa5.7□□□□□ -1.5
TOD6YBL054W AIM34Q03673 198 aa5.7□□□□□ -1.5
TOD6YBL054W YLR194CQ05777 254 aa5.7□□□□□ -1.5
TOD6YBL054W YBL112CQ3E7Y4 105 aa5.7□□□□□ -1.5
TOD6YBL054W YFL041W-AQ3E817 63 aa5.7□□□□□ -1.5
TOD6YBL054W MOH1P38191 138 aa5.69□□□□□ -1.5
TOD6YBL054W FIP1P45976 327 aa5.69□□□□□ -1.5
TOD6YBL054W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
TOD6YBL054W UGX2P32772 223 aa5.68□□□□□ -1.5
TOD6YBL054W DSE2P38844 325 aa5.68□□□□□ -1.5
TOD6YBL054W NRM1P53718 249 aa5.68□□□□□ -1.5
TOD6YBL054W ABF2Q02486 183 aa5.68□□□□□ -1.5
TOD6YBL054W RRG8Q06109 277 aa5.68□□□□□ -1.5
TOD6YBL054W IRC23Q08416 157 aa5.68□□□□□ -1.5
TOD6YBL054W YPR053CQ6Q5F3 151 aa5.68□□□□□ -1.5
TOD6YBL054W RPS8AP0CX39 200 aaKnown RBP5.67□□□□□ -1.5
TOD6YBL054W RPS8BP0CX40 200 aaKnown RBP5.67□□□□□ -1.5
TOD6YBL054W YCR085WP25650 117 aa5.67□□□□□ -1.5
TOD6YBL054W ADH5P38113 351 aaKnown RBP5.67□□□□□ -1.5
TOD6YBL054W GLO1P50107 326 aa5.67□□□□□ -1.5
TOD6YBL054W YOR008C-AQ3E7B9 74 aa5.67□□□□□ -1.5
TOD6YBL054W UTH1P36135 365 aa5.67□□□□□ -1.5
TOD6YBL054W NRG2P38082 220 aa5.67□□□□□ -1.5
TOD6YBL054W URM1P40554 99 aaPredicted RBP5.67□□□□□ -1.5
TOD6YBL054W FCY1Q12178 158 aa5.67□□□□□ -1.5
TOD6YBL054W MRPL23Q12487 163 aaPredicted RBP5.67□□□□□ -1.5
TOD6YBL054W MID2P36027 376 aa5.66□□□□□ -1.5
TOD6YBL054W YIA6P40556 373 aa5.66□□□□□ -1.5
TOD6YBL054W YFL051CP43552 160 aa5.66□□□□□ -1.5
TOD6YBL054W SKI6P46948 246 aaPredicted RBP5.66□□□□□ -1.5
TOD6YBL054W DUO1P53168 247 aaKnown RBP5.66□□□□□ -1.5
TOD6YBL054W YGR039WP53225 103 aa5.66□□□□□ -1.5
TOD6YBL054W YNL234WP53857 426 aa5.66□□□□□ -1.5
TOD6YBL054W YOL160WQ08321 113 aa5.66□□□□□ -1.5
TOD6YBL054W DAP1Q12091 152 aa5.66□□□□□ -1.5
TOD6YBL054W ATP15P21306 62 aa5.65□□□□□ -1.5
TOD6YBL054W RPB10P22139 70 aa5.65□□□□□ -1.5
TOD6YBL054W MSN1P22148 382 aa5.65□□□□□ -1.5
TOD6YBL054W CTR2P38865 189 aa5.65□□□□□ -1.5
TOD6YBL054W YMR317WQ04893 1140 aa5.65□□□□□ -1.5
TOD6YBL054W PRM7Q12459 698 aa5.65□□□□□ -1.5
TOD6YBL054W RPL28P02406 149 aaKnown RBP5.64□□□□□ -1.51
TOD6YBL054W MRPL38P35996 138 aaPredicted RBP5.64□□□□□ -1.51
TOD6YBL054W YDL186WP48568 277 aa5.64□□□□□ -1.51
TOD6YBL054W YDL009CQ12210 107 aa5.64□□□□□ -1.51
TOD6YBL054W YLR361C-AQ3E795 98 aa5.64□□□□□ -1.51
TOD6YBL054W ENV10Q99382 181 aa5.64□□□□□ -1.51
TOD6YBL054W Q0255P03881 472 aa5.63□□□□□ -1.51
TOD6YBL054W RPL42AP0CX27 106 aaKnown RBP5.63□□□□□ -1.51
TOD6YBL054W RPL42BP0CX28 106 aaKnown RBP5.63□□□□□ -1.51
TOD6YBL054W MRPL49P40858 161 aaPredicted RBP5.63□□□□□ -1.51
TOD6YBL054W CWP2P43497 92 aa5.63□□□□□ -1.51
TOD6YBL054W VPS55P47111 140 aa5.63□□□□□ -1.51
TOD6YBL054W CCW14O13547 238 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms