RNA–Protein interactions for RNA: ENST00000641967.1

AP000553.4-201, humanhuman

BASIC

Gene AP000553.4, Length 471 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.4-201ENST00000641967 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 TKTP29401 623 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 CYP2C18P33260 490 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 RFC2P35250 354 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 DNA2P51530 1060 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 CCL23P55773 120 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 PSMC1P62191 440 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 RPL7AP62424 266 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 OGDHQ02218 1023 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 PDE4CQ08493 712 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 MICAL3Q7RTP6 2002 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 ZNF280BQ86YH2 543 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 FUKQ8N0W3 1084 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 NOA1Q8NC60 698 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 SPATA4Q8NEY3 305 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 FNIP1Q8TF40 1166 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 ANKRD7Q92527 254 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 BADQ92934 168 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 CASD1Q96PB1 797 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 RTP3Q9BQQ7 232 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 MIS12Q9H081 205 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 CRTAC1Q9NQ79 661 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 CYLDQ9NQC7 956 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 SMARCAL1Q9NZC9 954 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 IP6K2Q9UHH9 426 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 TMEM59LQ9UK28 342 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 DSEQ9UL01 958 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
AP000553.4-201ENST00000641967 COL4A6Q14031 1691 aa13.08□□□□□ -0.31
AP000553.4-201ENST00000641967 TTC3P53804 2025 aa13.08□□□□□ -0.31
AP000553.4-201ENST00000641967 E5RJQ4 531 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 TULP2O00295 520 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 HOXA2O43364 376 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 CEP104O60308 925 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 ATP2C2O75185 946 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 ITGB1P05556 798 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 TYMPP19971 482 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 ITGB8P26012 769 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 BRCC3P46736 316 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 SHHQ15465 462 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 C9orf50Q5SZB4 431 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 PMF1Q6P1K2 205 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 PAQR9Q6ZVX9 377 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 NPAS4Q8IUM7 802 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 MMGT1Q8N4V1 131 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 MCEEQ96PE7 176 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 PKMYT1Q99640 499 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 CDH9Q9ULB4 789 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 PCDHB7Q9Y5E2 793 aa13.08□□□□□ -0.32
AP000553.4-201ENST00000641967 ARHGEF37A1IGU5 675 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 F8W810 466 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 I3L4J1 428 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PGRMC1O00264 195 aaKnown RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 KRT3P12035 628 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PCSK1P29120 753 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 ADORA2BP29275 332 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 RFC1P35251 1148 aaPredicted RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 SCNN1AP37088 669 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 C2orf54Q08AI8 447 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 CNKSR3Q6P9H4 555 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 DCUN1D2Q6PH85 259 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 OLFML1Q6UWY5 402 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 FAM183BPQ6ZVS7 135 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 JOSD2Q8TAC2 188 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 RNPC3Q96LT9 517 aaKnown RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 B3GNT5Q9BYG0 378 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 ANKZF1Q9H8Y5 726 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 TIMM13Q9Y5L4 95 aaPredicted RBP13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 PRUNE2Q8WUY3 3088 aa13.07□□□□□ -0.32
AP000553.4-201ENST00000641967 VCANP13611 3396 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms