RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 ATL2Q8NHH9 583 aa13.41□□□□□ -0.26
SPIN3-243ENST00000640717 ACTL9Q8TC94 416 aa13.41□□□□□ -0.26
SPIN3-243ENST00000640717 PEBP4Q96S96 227 aa13.41□□□□□ -0.26
SPIN3-243ENST00000640717 PABPC3Q9H361 631 aaKnown RBP13.41□□□□□ -0.26
SPIN3-243ENST00000640717 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPIN3-243ENST00000640717 BARX2Q9UMQ3 279 aaPredicted RBP13.41□□□□□ -0.26
SPIN3-243ENST00000640717 SMIM28A0A1B0GU29 152 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 HGSO14964 777 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-243ENST00000640717 MED7O43513 233 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 PPFIA2O75334 1257 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 OTUD4Q01804 1114 aaKnown RBP13.4□□□□□ -0.26
SPIN3-243ENST00000640717 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-243ENST00000640717 MSL3Q8N5Y2 521 aaKnown RBP13.4□□□□□ -0.26
SPIN3-243ENST00000640717 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 GTF3C2Q8WUA4 911 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-243ENST00000640717 SEC14L1Q92503 715 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 TMPRSS4Q9NRS4 437 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 PDE4DIPQ5VU43 2346 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 NRCAMQ92823 1304 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 TCRBV5S1A1TA0A578 114 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 NDUFAB1O14561 156 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 PSTPIP1O43586 416 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 PECAM1P16284 738 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-243ENST00000640717 CDH6P55285 790 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 SOWAHAQ2M3V2 549 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 MORN1Q5T089 497 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 KATNAL2Q8IYT4 538 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 EXD1Q8NHP7 514 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 GRIN2DO15399 1336 aa13.4□□□□□ -0.26
SPIN3-243ENST00000640717 P4HA1P13674 534 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 FNTAP49354 379 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 FAM71DQ8N9W8 422 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PAAF1Q9BRP4 392 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 RGS16O15492 202 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 RIPK2O43353 540 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 RNF8O76064 485 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 LSM8O95777 96 aaKnown RBP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 MLH1P40692 756 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 GRM5P41594 1212 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 FAM187BQ17R55 369 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 ANKRD42Q8N9B4 389 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 SLC2A14Q8TDB8 520 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 IPO4Q8TEX9 1081 aaKnown RBP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 ART4Q93070 314 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 EMID1Q96A84 441 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 SNF8Q96H20 258 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 GAD1Q99259 594 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PPME1Q9Y570 386 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 C17orf102A2RUQ5 167 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 CASTOR2A6NHX0 329 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 TRIM66O15016 1216 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PFKMP08237 780 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 IVDP26440 423 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 LSP1P33241 339 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 CETN2P41208 172 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 CDKN2BP42772 138 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 NUMBP49757 651 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 FLT3LGP49771 235 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 MTMR3Q13615 1198 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PPP2R5EQ16537 467 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 CA9Q16790 459 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPIN3-243ENST00000640717 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 SNX27Q96L92 541 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 NFKBIZQ9BYH8 718 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 SAYSD1Q9NPB0 183 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 USP18Q9UMW8 372 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PCDHGC3Q9UN70 934 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 IPPQ9Y573 584 aa13.39□□□□□ -0.27
SPIN3-243ENST00000640717 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 hCG_1818297A0A087WSY0 165 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 SIGLEC16A6NMB1 481 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 LIASO43766 372 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 GABBR2O75899 941 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 TJP3O95049 919 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 PIGHQ14442 188 aaPredicted RBP13.38□□□□□ -0.27
SPIN3-243ENST00000640717 NBPF20Q3BBV1 942 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 PPP1R15BQ5SWA1 713 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 RCOR2Q8IZ40 523 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 ITGA11Q9UKX5 1188 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 RRN3P2A6NIE6 340 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 POC1B-GALNT4F8VUJ3 575 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPIN3-243ENST00000640717 VDRP11473 427 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 BEST2Q8NFU1 509 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 TRIB2Q92519 343 aa13.38□□□□□ -0.27
SPIN3-243ENST00000640717 RHOBTB2Q9BYZ6 727 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms