RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
PRKCSH-218ENST00000593053 GDPD2Q9HCC8 539 aa13.98□□□□□ -0.17
PRKCSH-218ENST00000593053 PRMT8Q9NR22 394 aaPredicted RBP13.98□□□□□ -0.17
PRKCSH-218ENST00000593053 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
PRKCSH-218ENST00000593053 RBM12Q9NTZ6 932 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-218ENST00000593053 CFAP54Q96N23 3096 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 A8MXQ7 604 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 KINO60870 393 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 C4BPAP04003 597 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 ANXA13P27216 316 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 AP3M2P53677 418 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 DLG4P78352 724 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 CLDN10P78369 228 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 DPYDQ12882 1025 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 NCOA4Q13772 614 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 ITPRIPL2Q3MIP1 535 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 CEP135Q66GS9 1140 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 SCARA5Q6ZMJ2 495 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 TTC16Q8NEE8 873 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 RIN3Q8TB24 985 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 TMEM174Q8WUU8 243 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 ELMO3Q96BJ8 720 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 SPATA17Q96L03 361 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 CYP2S1Q96SQ9 504 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 SMYD3Q9H7B4 428 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 KIF9Q9HAQ2 790 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 TCHHQ07283 1943 aa13.97□□□□□ -0.17
PRKCSH-218ENST00000593053 COL4A2P08572 1712 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 CALUO43852 315 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 RHOBTB3O94955 611 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 KIF20AO95235 890 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 VNN1O95497 513 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 CKMP06732 381 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 CDH8P55286 799 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 LRRC32Q14392 662 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 PON2Q15165 354 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 WDR44Q5JSH3 913 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 CC2D1AQ6P1N0 951 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 SLC22A12Q96S37 553 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 IER2Q9BTL4 223 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 EBF3Q9H4W6 596 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 VRTNQ9H8Y1 702 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 ZSCAN32Q9NX65 697 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 TRAF3IP3Q9Y228 551 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 FRMD4BQ9Y2L6 1034 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 PCDHGA2Q9Y5H1 932 aa13.96□□□□□ -0.17
PRKCSH-218ENST00000593053 F5P12259 2224 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 TRAV19A0A0A6YYK7 116 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 F8VP50 259 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 TRIM66O15016 1216 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ZNF202O95125 648 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 USP17L7P0C7H9 530 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ARSAP15289 507 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 CACNA2D1P54289 1103 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 USP46P62068 366 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 FAM160A1Q05DH4 1040 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 RUNX3Q13761 415 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 GAS6Q14393 721 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 BECN1Q14457 450 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ZNF268Q14587 947 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 Q6ZS52 159 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 DENND5BQ6ZUT9 1274 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ZBTB44Q8NCP5 570 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 B3GALNT2Q8NCR0 500 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 NELL1Q92832 810 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 C8orf48Q96LL4 319 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 B3GNT5Q9BYG0 378 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 ELOVL4Q9GZR5 314 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 HPS4Q9NQG7 708 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 GCNT4Q9P109 453 aa13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 PTPRZ1P23471 2315 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-218ENST00000593053 MIA3Q5JRA6 1907 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 TICRRQ7Z2Z1 1910 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 CACNA1IQ9P0X4 2223 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 OTOL1A6NHN0 477 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 CLDN5O00501 218 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 TDGF1P13385 188 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 NR2F2P24468 414 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 CXCL12P48061 93 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 CCR3P51677 355 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 SATB1Q01826 763 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 KCNB1Q14721 858 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 PPP2R5DQ14738 602 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms