RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 LINC00597Q9H2U6 94 aa13.76□□□□□ -0.21
SMARCA4-211ENST00000586921 CPNE5Q9HCH3 593 aa13.76□□□□□ -0.21
SMARCA4-211ENST00000586921 CNTN3Q9P232 1028 aa13.76□□□□□ -0.21
SMARCA4-211ENST00000586921 CITO14578 2027 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 MEI4A8MW99 385 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 ZBTB24O43167 697 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 BRINP1O60477 761 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 KAT7O95251 611 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 LYPLA2O95372 231 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 CKMP06732 381 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 ACTN2P35609 894 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 MESP2Q0VG99 397 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 DMP1Q13316 513 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 GAB4Q2WGN9 574 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 BSNDQ8WZ55 320 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 PNKPQ96T60 521 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 TMEM206Q9H813 350 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
SMARCA4-211ENST00000586921 RELNP78509 3460 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 USP9YO00507 2555 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 GRK6P43250 576 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 CLDN6P56747 220 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 NUCB1Q02818 461 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 INF2Q27J81 1249 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 SLC39A12Q504Y0 691 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 NT5DC1Q5TFE4 455 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 DSTYKQ6XUX3 929 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 ERICH1Q86X53 443 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 ZNF513Q8N8E2 541 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 SH3RF2Q8TEC5 729 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 EIF2AK1Q9BQI3 630 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 MIR1-1HGQ9H1L0 117 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 CDT1Q9H211 546 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 GMIPQ9P107 970 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 TUBGCP4Q9UGJ1 667 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 SRPK3Q9UPE1 567 aa13.74□□□□□ -0.21
SMARCA4-211ENST00000586921 C2CD3Q4AC94 2353 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 TERTO14746 1132 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 HMGA1P17096 107 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 NAMPTP43490 491 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 KDSRQ06136 332 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 TARDBPQ13148 414 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 C4orf17Q53FE4 359 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 TRMT11Q7Z4G4 463 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 HAS1Q92839 578 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 NAF1Q96HR8 494 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 CYP2S1Q96SQ9 504 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 KIFC3Q9BVG8 833 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 FTSJ1Q9UET6 329 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 MAGED2Q9UNF1 606 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 ANK1P16157 1881 aa13.73□□□□□ -0.21
SMARCA4-211ENST00000586921 BCAT2O15382 392 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 CYP17A1P05093 508 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 HOXB2P14652 356 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 GSPT1P15170 499 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 NDUFV2P19404 249 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 ATP2B1P20020 1258 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 EIF2DP41214 584 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 GRIA2P42262 883 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 TNFRSF4P43489 277 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 CCR10P46092 362 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 SLC6A11P48066 632 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 AARSP49588 968 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 EFNA5P52803 228 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 BNC1Q01954 994 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 NFATC3Q12968 1075 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 RESTQ13127 1097 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 ZNF248Q8NDW4 579 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 OR10T2Q8NGX3 314 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 OXER1Q8TDS5 423 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 DNASE2BQ8WZ79 361 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 SLC22A12Q96S37 553 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
SMARCA4-211ENST00000586921 STK36Q9NRP7 1315 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 A0A087WWV3 80 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 HAPLN1P10915 354 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 TYMPP19971 482 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 SERINC3Q13530 473 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 PPP2R5AQ15172 486 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 SF3A1Q15459 793 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 INAVAQ3KP66 663 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 HES3Q5TGS1 186 aa13.71□□□□□ -0.21
SMARCA4-211ENST00000586921 USP49Q70CQ1 688 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms