RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 GIPC1O14908 333 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CLIC2O15247 247 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 TADA3O75528 432 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 IL18RAPO95256 599 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 TOP3BO95985 862 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 ZNF806P0C7X5 589 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CSH1P0DML2 217 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CSH2P0DML3 217 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 HDCP19113 662 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 SPINK2P20155 84 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 BDNFP23560 247 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 WEE1P30291 646 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 GBP1P32455 592 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CNR2P34972 360 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 HOXD13P35453 343 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 GRIK1P39086 918 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 RAP1GAPP47736 663 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 DGKEP52429 567 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 USP46P62068 366 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 PSMC1P62191 440 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 TSPY1Q01534 308 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CYP27A1Q02318 531 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CREB5Q02930 508 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 MESP2Q0VG99 397 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 IFRD2Q12894 506 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 CUL4AQ13619 759 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 DMC1Q14565 340 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 MTF1Q14872 753 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 POSTNQ15063 836 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 ST3GAL2Q16842 350 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 SOWAHAQ2M3V2 549 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 TMEM259Q4ZIN3 620 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 C2orf27AQ580R0 203 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 INTS6LQ5JSJ4 861 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 L1TD1Q5T7N2 865 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 STPG1Q5TH74 334 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 EMC10Q5UCC4 262 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 IL31Q6EBC2 164 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 HS2ST1Q7LGA3 356 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 SPATA2LQ8IUW3 424 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 DEFB119Q8N690 84 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CXorf38Q8TB03 319 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 NETO1Q8TDF5 533 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 SH3RF2Q8TEC5 729 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 C2orf15Q8WU43 125 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 GAB3Q8WWW8 586 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CD101Q93033 1021 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 ERLEC1Q96DZ1 483 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 INTS4Q96HW7 963 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 TSPAN18Q96SJ8 248 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 MMS19Q96T76 1030 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 PKMYT1Q99640 499 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 P2RY13Q9BPV8 354 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 ACBD6Q9BR61 282 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 MRPL45Q9BRJ2 306 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 IER2Q9BTL4 223 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 STRA6Q9BX79 667 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 MTMR12Q9C0I1 747 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CCSER1Q9C0I3 900 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 ECT2Q9H8V3 914 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CRTAC1Q9NQ79 661 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 OBP2AQ9NY56 170 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 RBAKQ9NYW8 714 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 GCNT4Q9P109 453 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 HSFX1Q9UBD0 423 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CCDC39Q9UFE4 941 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 CHORDC1Q9UHD1 332 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 SIX4Q9UIU6 781 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 FBXO2Q9UK22 296 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 DSEQ9UL01 958 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 C2CD2Q9Y426 696 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 SRPRBQ9Y5M8 271 aaKnown RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 PLXNB3Q9ULL4 1909 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 PLXND1Q9Y4D7 1925 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 PTPRBP23467 1997 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 TP53BP1Q12888 1972 aaPredicted RBP4.12□□□□□ -1.75
NUP85-209ENST00000578987 PTPRJQ12913 1337 aa4.12□□□□□ -1.75
NUP85-209ENST00000578987 SHROOM3Q8TF72 1996 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 CKAP5Q14008 2032 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 TRAV19A0A0A6YYK7 116 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 C4orf47A7E2U8 309 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 K7ELQ4 463 aaPredicted RBP4.11□□□□□ -1.75
NUP85-209ENST00000578987 LEFTY2O00292 366 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 GABRDO14764 452 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 SLC26A4O43511 780 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 LRP3O75074 770 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 ATG13O75143 517 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 NOL4O94818 638 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 EPN2O95208 641 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 KCNK5O95279 499 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 PAPSS2O95340 614 aaPredicted RBP4.11□□□□□ -1.75
NUP85-209ENST00000578987 CAVIN2O95810 425 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 LDHAP00338 332 aaKnown RBP4.11□□□□□ -1.75
NUP85-209ENST00000578987 CKMP06732 381 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 USP17L7P0C7H9 530 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 TMEM191BP0C7N4 346 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 HNRNPLP14866 589 aaKnown RBP eCLIP4.11□□□□□ -1.75
NUP85-209ENST00000578987 GAP43P17677 238 aa4.11□□□□□ -1.75
NUP85-209ENST00000578987 SYT1P21579 422 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms