RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 GRAMD4Q6IC98 578 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 ARMCX2Q7L311 632 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 KANSL1Q7Z3B3 1105 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 CXorf67Q86X51 503 aaPredicted RBP5.48□□□□□ -1.53
PRPF8-211ENST00000574728 CCAR1Q8IX12 1150 aaKnown RBP5.48□□□□□ -1.53
PRPF8-211ENST00000574728 CARFQ8N187 725 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 FBXL16Q8N461 479 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 SRBD1Q8N5C6 995 aaKnown RBP5.48□□□□□ -1.53
PRPF8-211ENST00000574728 LINC01356Q8N9X3 169 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 KLHDC9Q8NEP7 349 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 ZCCHC14Q8WYQ9 949 aaKnown RBP5.48□□□□□ -1.53
PRPF8-211ENST00000574728 TCEANC2Q96MN5 208 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 CEP89Q96ST8 783 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 UBAC1Q9BSL1 405 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 MENTQ9BUN1 341 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 LRRC2Q9BYS8 371 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 UPF3AQ9H1J1 476 aaKnown RBP5.48□□□□□ -1.53
PRPF8-211ENST00000574728 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 SEMA4AQ9H3S1 761 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 PDGFCQ9NRA1 345 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 C14orf119Q9NWQ9 140 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 CCPG1Q9ULG6 757 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 SPTBN5Q9NRC6 3674 aaKnown RBP5.48□□□□□ -1.53
PRPF8-211ENST00000574728 COL6A3P12111 3177 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 LRRC37A2A6NM11 1700 aa5.48□□□□□ -1.53
PRPF8-211ENST00000574728 NID2Q14112 1375 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ALPK3Q96L96 1907 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 GOLGA8AA7E2F4 631 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 GOLGA8BA8MQT2 603 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 H0YGN5 161 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ZBTB5O15062 677 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ADAMTS3O15072 1205 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 EPB41L2O43491 1005 aaKnown RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 CUTAO60888 179 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 TFRCP02786 760 aaKnown RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 CENPBP07199 599 aaPredicted RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 RXRAP19793 462 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 MCM5P33992 734 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ADCY8P40145 1251 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 HSD17B4P51659 736 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 MANFP55145 182 aaKnown RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 EVCP57679 992 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ERVK-21P61565 698 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 CD83Q01151 205 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ACVR2BQ13705 512 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 NOLC1Q14978 699 aaKnown RBP eCLIP5.47□□□□□ -1.532e-8■■■■□ 23.3
PRPF8-211ENST00000574728 WTAPQ15007 396 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 LRRC41Q15345 812 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 LRRC26Q2I0M4 334 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 BRDTQ58F21 947 aaPredicted RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ANO1Q5XXA6 986 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 APOA5Q6Q788 366 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 TMTC3Q6ZXV5 915 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 RALYLQ86SE5 291 aaKnown RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ADGRG2Q8IZP9 1017 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ANKRD35Q8N283 1001 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ZSCAN18Q8TBC5 510 aaPredicted RBP5.47□□□□□ -1.53
PRPF8-211ENST00000574728 NEK1Q96PY6 1258 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 PIGSQ96S52 555 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 SPZ1Q9BXG8 430 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 TRIM8Q9BZR9 551 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 MAF1Q9H063 256 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 TMEM168Q9H0V1 697 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 KCMF1Q9P0J7 381 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 TRANK1O15050 2925 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 GRIN2DO15399 1336 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 FRMPD4Q14CM0 1322 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 SYNRGQ9UMZ2 1314 aa5.47□□□□□ -1.53
PRPF8-211ENST00000574728 ZNFX1Q9P2E3 1918 aaKnown RBP5.46□□□□□ -1.53
PRPF8-211ENST00000574728 BAZ2BQ9UIF8 2168 aaKnown RBP5.46□□□□□ -1.53
PRPF8-211ENST00000574728 LOC102724159A0A0B4J2E5 919 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 DBX1A6NMT0 343 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 DNM1LO00429 736 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 KLHL18O94889 574 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 ARIH2O95376 493 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 PGK1P00558 417 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 CYP1A1P04798 512 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 PDGFRBP09619 1106 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 CST5P28325 142 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 ALDH5A1P51649 535 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 SCAND1P57086 179 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 GJA9P57773 515 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 TRDNQ13061 729 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 IKQ13123 557 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 KLF1Q13351 362 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 TOB2Q14106 344 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 PDCD1Q15116 288 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 PWP2Q15269 919 aaKnown RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 VMACQ2NL98 169 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 USH1GQ495M9 461 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 FAM26FQ5R3K3 315 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 ZBTB41Q5SVQ8 909 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 GJC2Q5T442 439 aaPredicted RBP5.46□□□□□ -1.54
PRPF8-211ENST00000574728 TMEM200BQ69YZ2 307 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 MCTP2Q6DN12 878 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 CCDC62Q6P9F0 684 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 OTOP2Q7RTS6 562 aa5.46□□□□□ -1.54
PRPF8-211ENST00000574728 RAB11FIP4Q86YS3 637 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms