RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
PRPF8-211ENST00000574728 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
PRPF8-211ENST00000574728 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
PRPF8-211ENST00000574728 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
PRPF8-211ENST00000574728 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
PRPF8-211ENST00000574728 FOXD1Q16676 465 aa15.48■□□□□ 0.07
PRPF8-211ENST00000574728 ADRA2BP18089 450 aa15.04■□□□□ -0
PRPF8-211ENST00000574728 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
PRPF8-211ENST00000574728 PIAS4Q8N2W9 510 aaPredicted RBP14.68□□□□□ -0.06
PRPF8-211ENST00000574728 MSH5O43196 834 aa14.24□□□□□ -0.13
PRPF8-211ENST00000574728 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
PRPF8-211ENST00000574728 KCNA4P22459 653 aa13.93□□□□□ -0.18
PRPF8-211ENST00000574728 SCAF1Q9H7N4 1312 aaKnown RBP13.84□□□□□ -0.19
PRPF8-211ENST00000574728 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
PRPF8-211ENST00000574728 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
PRPF8-211ENST00000574728 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
PRPF8-211ENST00000574728 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
PRPF8-211ENST00000574728 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
PRPF8-211ENST00000574728 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
PRPF8-211ENST00000574728 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
PRPF8-211ENST00000574728 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
PRPF8-211ENST00000574728 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
PRPF8-211ENST00000574728 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
PRPF8-211ENST00000574728 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
PRPF8-211ENST00000574728 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
PRPF8-211ENST00000574728 ZBTB22O15209 634 aa12.8□□□□□ -0.36
PRPF8-211ENST00000574728 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
PRPF8-211ENST00000574728 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
PRPF8-211ENST00000574728 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
PRPF8-211ENST00000574728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRPF8-211ENST00000574728 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
PRPF8-211ENST00000574728 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-211ENST00000574728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-211ENST00000574728 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
PRPF8-211ENST00000574728 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
PRPF8-211ENST00000574728 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
PRPF8-211ENST00000574728 APLP2Q06481 763 aa12.2□□□□□ -0.46
PRPF8-211ENST00000574728 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
PRPF8-211ENST00000574728 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
PRPF8-211ENST00000574728 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
PRPF8-211ENST00000574728 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.49
PRPF8-211ENST00000574728 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
PRPF8-211ENST00000574728 CAPN15O75808 1086 aa11.94□□□□□ -0.5
PRPF8-211ENST00000574728 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-211ENST00000574728 POLA2Q14181 598 aa11.77□□□□□ -0.53
PRPF8-211ENST00000574728 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
PRPF8-211ENST00000574728 ABCB7O75027 752 aa11.72□□□□□ -0.53
PRPF8-211ENST00000574728 FBLN2P98095 1184 aa11.68□□□□□ -0.54
PRPF8-211ENST00000574728 FKBP8Q14318 412 aa11.68□□□□□ -0.54
PRPF8-211ENST00000574728 NISCHQ9Y2I1 1504 aa11.67□□□□□ -0.54
PRPF8-211ENST00000574728 DSG3P32926 999 aa11.66□□□□□ -0.54
PRPF8-211ENST00000574728 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
PRPF8-211ENST00000574728 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
PRPF8-211ENST00000574728 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
PRPF8-211ENST00000574728 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
PRPF8-211ENST00000574728 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
PRPF8-211ENST00000574728 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
PRPF8-211ENST00000574728 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
PRPF8-211ENST00000574728 PROM2Q8N271 834 aa11.3□□□□□ -0.6
PRPF8-211ENST00000574728 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-211ENST00000574728 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
PRPF8-211ENST00000574728 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
PRPF8-211ENST00000574728 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
PRPF8-211ENST00000574728 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRPF8-211ENST00000574728 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
PRPF8-211ENST00000574728 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
PRPF8-211ENST00000574728 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
PRPF8-211ENST00000574728 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
PRPF8-211ENST00000574728 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
PRPF8-211ENST00000574728 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
PRPF8-211ENST00000574728 REM2Q8IYK8 340 aaPredicted RBP10.92□□□□□ -0.66
PRPF8-211ENST00000574728 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.66
PRPF8-211ENST00000574728 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
PRPF8-211ENST00000574728 MIER1Q8N108 512 aa10.88□□□□□ -0.67
PRPF8-211ENST00000574728 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
PRPF8-211ENST00000574728 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
PRPF8-211ENST00000574728 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
PRPF8-211ENST00000574728 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
PRPF8-211ENST00000574728 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
PRPF8-211ENST00000574728 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
PRPF8-211ENST00000574728 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
PRPF8-211ENST00000574728 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
PRPF8-211ENST00000574728 PKD2Q13563 968 aa10.61□□□□□ -0.71
PRPF8-211ENST00000574728 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
PRPF8-211ENST00000574728 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
PRPF8-211ENST00000574728 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRPF8-211ENST00000574728 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
PRPF8-211ENST00000574728 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
PRPF8-211ENST00000574728 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
PRPF8-211ENST00000574728 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.722e-14■■□□□ 11.7
PRPF8-211ENST00000574728 NUBP1P53384 320 aa10.55□□□□□ -0.72
PRPF8-211ENST00000574728 PRKAR2AP13861 404 aaKnown RBP10.54□□□□□ -0.72
PRPF8-211ENST00000574728 GSE1Q14687 1217 aa10.54□□□□□ -0.72
PRPF8-211ENST00000574728 DCAF8Q5TAQ9 597 aa10.51□□□□□ -0.73
PRPF8-211ENST00000574728 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
PRPF8-211ENST00000574728 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
PRPF8-211ENST00000574728 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
PRPF8-211ENST00000574728 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
PRPF8-211ENST00000574728 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
PRPF8-211ENST00000574728 RASEFQ8IZ41 740 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms