RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CDHR1Q96JP9 859 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 PHACTR1Q9C0D0 580 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 ZNF518BQ9C0D4 1074 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 ZNF302Q9NR11 478 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 HEY2Q9UBP5 337 aa19.99■□□□□ 0.79
SCARF1-206ENST00000573852 MAFBQ9Y5Q3 323 aaPredicted RBP19.99■□□□□ 0.79
SCARF1-206ENST00000573852 EIF4BP23588 611 aaKnown RBP19.98■□□□□ 0.79
SCARF1-206ENST00000573852 KDELR1P24390 212 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 PTPN20Q4JDL3 420 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 XPO7Q9UIA9 1087 aaKnown RBP19.98■□□□□ 0.79
SCARF1-206ENST00000573852 CAPSQ13938 189 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 C4orf50Q6ZRC1 276 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 SLC7A3Q8WY07 619 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 PRR11Q96HE9 360 aaPredicted RBP19.98■□□□□ 0.79
SCARF1-206ENST00000573852 NIF3L1Q9GZT8 377 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 GINM1Q9NU53 330 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 CYTH4Q9UIA0 394 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 PCDHGC3Q9UN70 934 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 CHMP2BQ9UQN3 213 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 EFR3BQ9Y2G0 817 aa19.98■□□□□ 0.79
SCARF1-206ENST00000573852 CFAP69A5D8W1 941 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 A6NHS1 94 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 FAM189A1O60320 539 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 STAM2O75886 525 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 KHDC1Q4VXA5 237 aaKnown RBP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 ANO7Q6IWH7 933 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 WDR49Q8IV35 697 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 RTKN2Q8IZC4 609 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 FAM71DQ8N9W8 422 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 PTCD3Q96EY7 689 aaKnown RBP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 OSBPL1AQ9BXW6 950 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 KCNK13Q9HB14 408 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 ZNF214Q9UL59 606 aaPredicted RBP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 ATG7O95352 703 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 EGFRP00533 1210 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 KRT3P12035 628 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 TAZQ16635 292 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 CDCA2Q69YH5 1023 aaPredicted RBP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 CIAPIN1Q6FI81 312 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 DSTYKQ6XUX3 929 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 PDIK1LQ8N165 341 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 SH3TC2Q8TF17 1288 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 ALKBH8Q96BT7 664 aaKnown RBP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 SERAC1Q96JX3 654 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 TSSK1BQ9BXA7 367 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 TRIM55Q9BYV6 548 aa19.97■□□□□ 0.79
SCARF1-206ENST00000573852 RPL26L1Q9UNX3 145 aaKnown RBP19.97■□□□□ 0.79
SCARF1-206ENST00000573852 CCNHP51946 323 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-206ENST00000573852 CXCL9Q07325 125 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 FAM182AQ5T1J6 154 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 EMC1Q8N766 993 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 TTC13Q8NBP0 860 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 FBXO41Q8TF61 875 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 TMEM134Q9H6X4 195 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 FBXO6Q9NRD1 293 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-206ENST00000573852 SIGLEC16A6NMB1 481 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 LPXNO60711 386 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 HAUS5O94927 633 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 UPP2O95045 317 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 MT-ND3P03897 115 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 KRT7P08729 469 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 ATP6V1C1P21283 382 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 TAF5Q15542 800 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 GNPTABQ3T906 1256 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 BTBD10Q9BSF8 475 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 DCLRE1BQ9H816 532 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 PCSK1NQ9UHG2 260 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 RLFQ13129 1914 aa19.96■□□□□ 0.79
SCARF1-206ENST00000573852 ADCY3O60266 1144 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 HNRNPCL1O60812 293 aaKnown RBP19.95■□□□□ 0.78
SCARF1-206ENST00000573852 DHRS4L1P0CG22 281 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 SERPINB3P29508 390 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 ETV4P43268 484 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 BASP1P80723 227 aaKnown RBP19.95■□□□□ 0.78
SCARF1-206ENST00000573852 FSTL1Q12841 308 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 TMEM132BQ14DG7 1078 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 SGSM1Q2NKQ1 1148 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 TEX9Q8N6V9 391 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 TTLL6Q8N841 843 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 TCHPQ9BT92 498 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 FRMD8P1Q9BZ68 369 aaPredicted RBP19.95■□□□□ 0.78
SCARF1-206ENST00000573852 ZFATQ9P243 1243 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 CCDC22O60826 627 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 LINGO3P0C6S8 592 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 PCK1P35558 622 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 ELK3P41970 407 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 ARFIP2P53365 341 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 AP3M2P53677 418 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 DPYSL3Q14195 570 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 SYCP2LQ5T4T6 812 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 FAM111AQ96PZ2 611 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 CYTH2Q99418 400 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 TMEM120AQ9BXJ8 343 aa19.95■□□□□ 0.78
SCARF1-206ENST00000573852 C2orf71A6NGG8 1288 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 GSC2O15499 205 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 ASPAP45381 313 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 NEK3P51956 506 aa19.94■□□□□ 0.78
SCARF1-206ENST00000573852 HIRAP54198 1017 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms