RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ATP6V1C1P21283 382 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 AP3M2P53677 418 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 HADHQ16836 314 aaKnown RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 KHDC1Q4VXA5 237 aaKnown RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 RFWD3Q6PCD5 774 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 C4orf50Q6ZRC1 276 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 ZBTB33Q86T24 672 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 BRSK2Q8IWQ3 736 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 FAM71DQ8N9W8 422 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 ZBED3Q96IU2 234 aaPredicted RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 BTBD10Q9BSF8 475 aa16.39■□□□□ 0.21
NUP88-207ENST00000573584 FRMD8P1Q9BZ68 369 aaPredicted RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 MAFBQ9Y5Q3 323 aaPredicted RBP16.39■□□□□ 0.21
NUP88-207ENST00000573584 ARID2Q68CP9 1835 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 CCDC189A1A4V9 331 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 LMNAP02545 664 aaKnown RBP16.38■□□□□ 0.21
NUP88-207ENST00000573584 KDELR1P24390 212 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 ARFIP2P53365 341 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 BASP1P80723 227 aaKnown RBP16.38■□□□□ 0.21
NUP88-207ENST00000573584 SCARA5Q6ZMJ2 495 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 WDR49Q8IV35 697 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 JOSD2Q8TAC2 188 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 CYTH2Q99418 400 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 TUBB6Q9BUF5 446 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 ARL8BQ9NVJ2 186 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 CHMP2BQ9UQN3 213 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 WDR81Q562E7 1941 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 A6NHS1 94 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 CD48P09326 243 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 NEFHP12036 1026 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
NUP88-207ENST00000573584 ZBTB16Q05516 673 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 SGSM1Q2NKQ1 1148 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 KIAA0319LQ8IZA0 1049 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 TEPSINQ96N21 525 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 IKBKGQ9Y6K9 419 aa16.38■□□□□ 0.21
NUP88-207ENST00000573584 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
NUP88-207ENST00000573584 TRPC3Q13507 836 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 PTPN20Q4JDL3 420 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 ANO7Q6IWH7 933 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 DENND1BQ6P3S1 775 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 APBB1IPQ7Z5R6 666 aaPredicted RBP16.37■□□□□ 0.21
NUP88-207ENST00000573584 LMNTD2Q8IXW0 634 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 THNSL1Q8IYQ7 743 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 NSL1Q96IY1 281 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 IQANK1A0A1B0GTG1 560 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 SIGLEC16A6NMB1 481 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 SERPINB3P29508 390 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 CCNHP51946 323 aaPredicted RBP16.37■□□□□ 0.21
NUP88-207ENST00000573584 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 TSNAXIP1Q2TAA8 658 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 DSTYKQ6XUX3 929 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 RFX6Q8HWS3 928 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 KCTD6Q8NC69 237 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 DNAJC9Q8WXX5 260 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 PTCD3Q96EY7 689 aaKnown RBP16.37■□□□□ 0.21
NUP88-207ENST00000573584 MYOZ2Q9NPC6 264 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 TJP2Q9UDY2 1190 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 PCSK1NQ9UHG2 260 aa16.37■□□□□ 0.21
NUP88-207ENST00000573584 GYG2O15488 501 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 ELK3P41970 407 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 EIF3EP60228 445 aaKnown RBP16.36■□□□□ 0.21
NUP88-207ENST00000573584 PTK7Q13308 1070 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 CAPSQ13938 189 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 IGDCC3Q8IVU1 814 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 TTC17Q96AE7 1141 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 SERAC1Q96JX3 654 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 FAM111AQ96PZ2 611 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 FBXO6Q9NRD1 293 aaPredicted RBP16.36■□□□□ 0.21
NUP88-207ENST00000573584 MTO1Q9Y2Z2 717 aaKnown RBP16.36■□□□□ 0.21
NUP88-207ENST00000573584 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
NUP88-207ENST00000573584 SMAPO00193 183 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 GSC2O15499 205 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 ADCY3O60266 1144 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 CD19P15391 556 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 NRLP54845 237 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 SESN3P58005 492 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 PSMC1P62191 440 aaKnown RBP16.36■□□□□ 0.21
NUP88-207ENST00000573584 DPYSL3Q14195 570 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 MUM1Q2TAK8 710 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 EMC1Q8N766 993 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 TMEM120AQ9BXJ8 343 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 KCNK13Q9HB14 408 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 STOML1Q9UBI4 398 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 COL4A5P29400 1685 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 KIAA1217Q5T5P2 1943 aa16.36■□□□□ 0.21
NUP88-207ENST00000573584 PDHA1P08559 390 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 RBP3P10745 1247 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 TSHRP16473 764 aa16.35■□□□□ 0.21
NUP88-207ENST00000573584 TFAMQ00059 246 aaKnown RBP16.35■□□□□ 0.21
NUP88-207ENST00000573584 CCDC6Q16204 474 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms