RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CAP1Q01518 475 aa7□□□□□ -1.29
SMG1-217ENST00000569764 KCNC4Q03721 635 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ANKRD39Q53RE8 183 aa7□□□□□ -1.29
SMG1-217ENST00000569764 XKR3Q5GH77 459 aa7□□□□□ -1.29
SMG1-217ENST00000569764 BPHLQ86WA6 291 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 TTC39CQ8N584 583 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ZNF483Q8TF39 744 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 FAXDC2Q96IV6 333 aa7□□□□□ -1.29
SMG1-217ENST00000569764 VPS39Q96JC1 886 aa7□□□□□ -1.29
SMG1-217ENST00000569764 FAM20AQ96MK3 541 aa7□□□□□ -1.29
SMG1-217ENST00000569764 TSG101Q99816 390 aa7□□□□□ -1.29
SMG1-217ENST00000569764 PACSIN1Q9BY11 444 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ZSCAN16Q9H4T2 348 aaPredicted RBP7□□□□□ -1.29
SMG1-217ENST00000569764 NSUN3Q9H649 340 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 WDR6Q9NNW5 1121 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7□□□□□ -1.29
SMG1-217ENST00000569764 SPG21Q9NZD8 308 aa7□□□□□ -1.29
SMG1-217ENST00000569764 RBPJLQ9UBG7 517 aa7□□□□□ -1.29
SMG1-217ENST00000569764 AASSQ9UDR5 926 aa7□□□□□ -1.29
SMG1-217ENST00000569764 DBR1Q9UK59 544 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 CROTQ9UKG9 612 aa7□□□□□ -1.29
SMG1-217ENST00000569764 NOC2LQ9Y3T9 749 aaKnown RBP7□□□□□ -1.29
SMG1-217ENST00000569764 SMCHD1A6NHR9 2005 aa7□□□□□ -1.29
SMG1-217ENST00000569764 ASTN2O75129 1339 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 ENC1O14682 589 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 KIAA0355O15063 1070 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 ALDH2P05091 517 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 PGK2P07205 417 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 FMR1Q06787 632 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMG1-217ENST00000569764 MDH1BQ5I0G3 518 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 EMC10Q5UCC4 262 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TYW1BQ6NUM6 668 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 USP49Q70CQ1 688 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 AADATQ8N5Z0 425 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 CSGALNACT1Q8TDX6 532 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SPIRE2Q8WWL2 714 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 IRX2Q9BZI1 471 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 SCAND2PQ9GZW5 306 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 ANO10Q9NW15 660 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 NCDNQ9UBB6 729 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 MYO6Q9UM54 1294 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 PCDHGB4Q9UN71 923 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 DNM3Q9UQ16 869 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 A0A0G2JPF8 293 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 POTEB3A0JP26 581 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 ARHGAP10A1A4S6 786 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 HNRNPCL3B7ZW38 293 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 INO80B-WBP1J3KQ70 363 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SMAD7O15105 426 aaKnown RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 HOXC11O43248 304 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 KERAO60938 352 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TADA2AO75478 443 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 HNRNPCL4P0DMR1 293 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 RARGP13631 454 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 IFNAR1P17181 557 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 PPP1R2P41236 205 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 HTR3AP46098 478 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SCNN1BP51168 640 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 GPR139Q6DWJ6 353 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 PPP1R2P3Q6NXS1 205 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 POTEBQ6S5H4 581 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 C11orf57Q6ZUT1 292 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 NCCRP1Q6ZVX7 275 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMG1-217ENST00000569764 FMR1NBQ8N0W7 255 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 CMTM3Q96MX0 182 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 PSKH2Q96QS6 385 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 OXCT2Q9BYC2 517 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 TUBA8Q9NY65 449 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 SEPT9Q9UHD8 586 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 GABRQQ9UN88 632 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SNX6Q9UNH7 406 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 A0A1W2PQ45 241 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 A0A1W2PQY0 241 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 ADCY6O43306 1168 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 EXTL3O43909 919 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 IFNB1P01574 187 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 ITGA4P13612 1032 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 GAP43P17677 238 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SOX5P35711 763 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 GNL1P36915 607 aaPredicted RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 ASMTP46597 345 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 HAAOP46952 286 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TKTL1P51854 596 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 RPS6P62753 249 aaKnown RBP6.99□□□□□ -1.29
SMG1-217ENST00000569764 CRY1Q16526 586 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 QRICH1Q2TAL8 776 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TREML2Q5T2D2 321 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SHC4Q6S5L8 630 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 SYT10Q6XYQ8 523 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 OTOP2Q7RTS6 562 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TADA2BQ86TJ2 420 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TMUB1Q9BVT8 246 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 TIPINQ9BVW5 301 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 VPS54Q9P1Q0 977 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 ARHGAP28Q9P2N2 729 aa6.99□□□□□ -1.29
SMG1-217ENST00000569764 FSCN2O14926 492 aa6.98□□□□□ -1.29
SMG1-217ENST00000569764 N4BP3O15049 544 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms