RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	TPM4	P67936	248 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	SCAP	Q12770	1279 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	SEPT2	Q15019	361 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	WDR43	Q15061	677 aa	Known RBP eCLIP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	CCDC91	Q7Z6B0	441 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	SUGP1	Q8IWZ8	645 aa	Known RBP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	TTC5	Q8N0Z6	440 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	KIAA1524	Q8TCG1	905 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	SSH1	Q8WYL5	1049 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	CYFIP2	Q96F07	1278 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	MRI1	Q9BV20	369 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	ADI1	Q9BV57	179 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	UTP14A	Q9BVJ6	771 aa	Known RBP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	TSPY26P	Q9H489	355 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	DNAJC28	Q9NX36	388 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	ATP11B	Q9Y2G3	1177 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	N4BP2	Q86UW6	1770 aa	Predicted RBP	5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	PCSK5	Q92824	1860 aa		5.54	□□□□□ -1.52
CBFB-208	ENST00000567947	ELP1	O95163	1332 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	TRIM75P	A6NK02	468 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	FAM171A2	A8MVW0	826 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	POLRMT	O00411	1230 aa	Known RBP	5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	CHL1	O00533	1208 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	DHX16	O60231	1041 aa	Known RBP	5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	NEMF	O60524	1076 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	CDKL5	O76039	1030 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	ELANE	P08246	267 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	ZNF853	P0CG23	659 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	HKR1	P10072	659 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	AGXT	P21549	392 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	TMPO	P42166	694 aa	Known RBP	5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	ALDH1A3	P47895	512 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	SLC6A9	P48067	706 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	SEC24C	P53992	1094 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	GSC	P56915	257 aa	Predicted RBP	5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	TP53BP2	Q13625	1128 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	EGFLAM	Q63HQ2	1017 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	OLFML1	Q6UWY5	402 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	LCORL	Q8N3X6	602 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	SUPT20H	Q8NEM7	779 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	ASB10	Q8WXI3	467 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	RUNDC1	Q96C34	613 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	UHRF1	Q96T88	793 aa	Predicted RBP	5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	TMEM74B	Q9NUR3	256 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	LRRC37A	A6NMS7	1700 aa		5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	COL11A2	P13942	1736 aa	Predicted RBP	5.53	□□□□□ -1.52
CBFB-208	ENST00000567947	SNED1	Q8TER0	1413 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	CCDC196	A0A1B0GTZ2	297 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947		A0A1B0GUL7	405 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	EPB41L2	O43491	1005 aa	Known RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	CAMTA2	O94983	1202 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	CAVIN2	O95810	425 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	IVL	P07476	585 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	MMP10	P09238	476 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	TPM1	P09493	284 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	ATP5J	P18859	108 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	KCNA3	P22001	575 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	U2AF2	P26368	475 aa	Known RBP eCLIP	5.52	□□□□□ -1.53	2e-7	■■■■□ 20.7
CBFB-208	ENST00000567947	WAS	P42768	502 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	SSR1	P43307	286 aa	Known RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	EIF4A1	P60842	406 aa	Known RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	MXRA7	P84157	204 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	OCA2	Q04671	838 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	NCBP1	Q09161	790 aa	Known RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	REST	Q13127	1097 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	CRY2	Q49AN0	593 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	TICAM2	Q86XR7	235 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	MAPKAPK5	Q8IW41	473 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	WDR63	Q8IWG1	891 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	TMEM132C	Q8N3T6	1108 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	BRIP1	Q9BX63	1249 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	FAM107B	Q9H098	131 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	TMEM140	Q9NV12	185 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	SLC23A1	Q9UHI7	598 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	ZBTB21	Q9ULJ3	1066 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	MAP3K2	Q9Y2U5	619 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	GPR45	Q9Y5Y3	372 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	SCN4A	P35499	1836 aa		5.52	□□□□□ -1.53
CBFB-208	ENST00000567947	MAST3	O60307	1309 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	MYH3	P11055	1940 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	UNC119B	A6NIH7	251 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	ZAR1L	A6NP61	321 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	RPS6KA5	O75582	802 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	POMC	P01189	267 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	NEFH	P12036	1026 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	FPR1	P21462	350 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	PCSK1	P29120	753 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	USP8	P40818	1118 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	PER3	P56645	1201 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	RAP2B	P61225	183 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	ATP8B2	P98198	1209 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	DDR1	Q08345	913 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	FOXI1	Q12951	378 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	KLF1	Q13351	362 aa	Predicted RBP	5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	MTM1	Q13496	603 aa		5.51	□□□□□ -1.53
CBFB-208	ENST00000567947	UBXN2B	Q14CS0	331 aa		5.51	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms