RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, humanhuman

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-208ENST00000567947 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
CBFB-208ENST00000567947 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
CBFB-208ENST00000567947 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
CBFB-208ENST00000567947 PHF23Q9BUL5 403 aaPredicted RBP22.53■■□□□ 1.2
CBFB-208ENST00000567947 FOXD1Q16676 465 aa21.05■□□□□ 0.96
CBFB-208ENST00000567947 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
CBFB-208ENST00000567947 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
CBFB-208ENST00000567947 ADRA2BP18089 450 aa19.89■□□□□ 0.77
CBFB-208ENST00000567947 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
CBFB-208ENST00000567947 MSH5O43196 834 aa19.58■□□□□ 0.72
CBFB-208ENST00000567947 POTEDQ86YR6 584 aa18.64■□□□□ 0.57
CBFB-208ENST00000567947 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
CBFB-208ENST00000567947 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
CBFB-208ENST00000567947 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
CBFB-208ENST00000567947 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
CBFB-208ENST00000567947 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
CBFB-208ENST00000567947 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
CBFB-208ENST00000567947 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
CBFB-208ENST00000567947 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
CBFB-208ENST00000567947 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
CBFB-208ENST00000567947 KCNA4P22459 653 aa17.32■□□□□ 0.36
CBFB-208ENST00000567947 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CBFB-208ENST00000567947 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
CBFB-208ENST00000567947 RNF39Q9H2S5 420 aa16.75■□□□□ 0.27
CBFB-208ENST00000567947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
CBFB-208ENST00000567947 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
CBFB-208ENST00000567947 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
CBFB-208ENST00000567947 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
CBFB-208ENST00000567947 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
CBFB-208ENST00000567947 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
CBFB-208ENST00000567947 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
CBFB-208ENST00000567947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
CBFB-208ENST00000567947 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
CBFB-208ENST00000567947 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
CBFB-208ENST00000567947 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
CBFB-208ENST00000567947 APLP2Q06481 763 aa15.98■□□□□ 0.15
CBFB-208ENST00000567947 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
CBFB-208ENST00000567947 ZBTB22O15209 634 aa15.96■□□□□ 0.15
CBFB-208ENST00000567947 CAPN15O75808 1086 aa15.9■□□□□ 0.14
CBFB-208ENST00000567947 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
CBFB-208ENST00000567947 DSG3P32926 999 aa15.8■□□□□ 0.12
CBFB-208ENST00000567947 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
CBFB-208ENST00000567947 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
CBFB-208ENST00000567947 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
CBFB-208ENST00000567947 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
CBFB-208ENST00000567947 ABCB7O75027 752 aa15.55■□□□□ 0.08
CBFB-208ENST00000567947 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
CBFB-208ENST00000567947 POLA2Q14181 598 aa15.42■□□□□ 0.06
CBFB-208ENST00000567947 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
CBFB-208ENST00000567947 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
CBFB-208ENST00000567947 FBLN2P98095 1184 aa14.97□□□□□ -0.01
CBFB-208ENST00000567947 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CBFB-208ENST00000567947 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
CBFB-208ENST00000567947 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
CBFB-208ENST00000567947 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
CBFB-208ENST00000567947 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
CBFB-208ENST00000567947 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
CBFB-208ENST00000567947 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
CBFB-208ENST00000567947 REM2Q8IYK8 340 aaPredicted RBP14.64□□□□□ -0.07
CBFB-208ENST00000567947 POTEHQ6S545 545 aa14.63□□□□□ -0.07
CBFB-208ENST00000567947 ZNF692Q9BU19 519 aaPredicted RBP14.59□□□□□ -0.07
CBFB-208ENST00000567947 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
CBFB-208ENST00000567947 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
CBFB-208ENST00000567947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
CBFB-208ENST00000567947 SPDYE1Q8NFV5 336 aaPredicted RBP14.4□□□□□ -0.1
CBFB-208ENST00000567947 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
CBFB-208ENST00000567947 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
CBFB-208ENST00000567947 PIP4P2Q8N4L2 257 aa14.3□□□□□ -0.12
CBFB-208ENST00000567947 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
CBFB-208ENST00000567947 PROM2Q8N271 834 aa14.23□□□□□ -0.13
CBFB-208ENST00000567947 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
CBFB-208ENST00000567947 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
CBFB-208ENST00000567947 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
CBFB-208ENST00000567947 FKBP8Q14318 412 aa14.04□□□□□ -0.16
CBFB-208ENST00000567947 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
CBFB-208ENST00000567947 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
CBFB-208ENST00000567947 HAX1O00165 279 aa13.87□□□□□ -0.19
CBFB-208ENST00000567947 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
CBFB-208ENST00000567947 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
CBFB-208ENST00000567947 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
CBFB-208ENST00000567947 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
CBFB-208ENST00000567947 EVX2Q03828 476 aa13.76□□□□□ -0.21
CBFB-208ENST00000567947 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
CBFB-208ENST00000567947 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
CBFB-208ENST00000567947 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
CBFB-208ENST00000567947 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
CBFB-208ENST00000567947 MIER1Q8N108 512 aa13.62□□□□□ -0.23
CBFB-208ENST00000567947 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
CBFB-208ENST00000567947 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
CBFB-208ENST00000567947 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
CBFB-208ENST00000567947 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
CBFB-208ENST00000567947 CLCN6P51797 869 aa13.51□□□□□ -0.25
CBFB-208ENST00000567947 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
CBFB-208ENST00000567947 GABBR2O75899 941 aa13.49□□□□□ -0.25
CBFB-208ENST00000567947 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
CBFB-208ENST00000567947 NUBP1P53384 320 aa13.41□□□□□ -0.26
CBFB-208ENST00000567947 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
CBFB-208ENST00000567947 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
CBFB-208ENST00000567947 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
CBFB-208ENST00000567947 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms