RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NELL2Q99435 816 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 UNKQ9C0B0 810 aaKnown RBP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 KLC4Q9NSK0 619 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 FNIP2Q9P278 1114 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 DNMT3BQ9UBC3 853 aaKnown RBP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 SHOC2Q9UQ13 582 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 RHPN2P1A8MT19 583 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 RAMP2O60895 175 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 MT-ND5P03915 603 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 MYL1P05976 194 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 CHRM2P08172 466 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 TXNP10599 105 aaKnown RBP4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 LRPAP1P30533 357 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 NEK3P51956 506 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 MAPK10P53779 464 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 SIM1P81133 766 aaPredicted RBP4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 DAG1Q14118 895 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 KLHDC7AQ5VTJ3 777 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 SFRP4Q6FHJ7 346 aaPredicted RBP4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 LAYNQ6UX15 382 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 MAVSQ7Z434 540 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 CCAR1Q8IX12 1150 aaKnown RBP4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 B3GALNT2Q8NCR0 500 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 BPIFB1Q8TDL5 484 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 FKBP10Q96AY3 582 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 FBXL20Q96IG2 436 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 CCDC136Q96JN2 1154 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 MRIQ9BWK5 157 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 BRIP1Q9BX63 1249 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 STK31Q9BXU1 1019 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 PRDM13Q9H4Q3 707 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 PAXBP1Q9Y5B6 917 aa4.76□□□□□ -1.65
HERPUD1-212ENST00000567944 A0A087WZ62 844 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 ZAR1LA6NP61 321 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 H7C4K7 107 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 IL18RAPO95256 599 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 MYL3P08590 195 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 BTF3P20290 206 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 ADORA2AP29274 412 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 LIPAP38571 399 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 CLK3P49761 638 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 RARRES1P49788 294 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 ATXN1P54253 815 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 MRPS35P82673 323 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 TBCCQ15814 346 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 MGAT5BQ3V5L5 792 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 SLC44A4Q53GD3 710 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 OLFML1Q6UWY5 402 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 PEG10Q86TG7 708 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 PARD3BQ8TEW8 1205 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 SNX22Q96L94 193 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 GBA2Q9HCG7 927 aaPredicted RBP4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 DKK4Q9UBT3 224 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 MID2Q9UJV3 735 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 PHTF1Q9UMS5 762 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 SNX13Q9Y5W8 968 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 CDY1Q9Y6F8 540 aa4.75□□□□□ -1.65
HERPUD1-212ENST00000567944 LOC102723971A0A1B0GUV8 181 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 POM121BA6NF01 834 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 FOXN3O00409 490 aaPredicted RBP4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 A1BGP04217 495 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 IL6RP08887 468 aaPredicted RBP4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 JUPP14923 745 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 HMGA2P52926 109 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 EIF2B5Q13144 721 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 E2F2Q14209 437 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 LY6KQ17RY6 165 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 NBPF8Q3BBV2 869 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 PRR16Q569H4 304 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 ZNF362Q5T0B9 420 aaPredicted RBP4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 KAZNQ674X7 775 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 NOL8Q76FK4 1167 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 CCDC146Q8IYE0 955 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 SVIPQ8NHG7 77 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 ACTRT2Q8TDY3 377 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 PPP2R3CQ969Q6 453 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 DHX36Q9H2U1 1008 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 GJB4Q9NTQ9 266 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 SLC52A1Q9NWF4 448 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 CAPN11Q9UMQ6 739 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 SNX14Q9Y5W7 946 aa4.74□□□□□ -1.65
HERPUD1-212ENST00000567944 CCDC194A0A1B0GVG4 234 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 A0A1W2PPC4 97 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 CCP110O43303 1012 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 NCK2O43639 380 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 RRP9O43818 475 aaKnown RBP4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 RASSF9O75901 435 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 ITPKBP27987 946 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 GRIA3P42263 894 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 CARSP49589 748 aaKnown RBP4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 TGFB2P61812 414 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 KRT17Q04695 432 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 ZNF750Q32MQ0 723 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 LIX1LQ8IVB5 337 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 ABRAQ8N0Z2 381 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 ATP11CQ8NB49 1132 aa4.73□□□□□ -1.65
HERPUD1-212ENST00000567944 SIMC1Q8NDZ2 872 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms