RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PCDHA6Q9UN73 950 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 SHOC2Q9UQ13 582 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 SSX2IPQ9Y2D8 614 aa4.21□□□□□ -1.74
CDH1-211ENST00000567320 CYP2D7A0A087X1C5 515 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 POC1B-GALNT4F8VUJ3 575 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 UBE2Q2LH0YL09 131 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 hCG_1984214I3L0E3 225 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 MYO1FO00160 1098 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 DLDP09622 509 aaKnown RBP4.2□□□□□ -1.74
CDH1-211ENST00000567320 SFPQP23246 707 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDH1-211ENST00000567320 KRT17Q04695 432 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 PLS1Q14651 629 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 Q6ZWC4 215 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 SLC15A3Q8IY34 581 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 GALNT4Q8N4A0 578 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 C8orf58Q8NAV2 365 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 MTFMTQ96DP5 389 aaKnown RBP4.2□□□□□ -1.74
CDH1-211ENST00000567320 CNNM1Q9NRU3 951 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 CPA4Q9UI42 421 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 NDRG4Q9ULP0 352 aaKnown RBP4.2□□□□□ -1.74
CDH1-211ENST00000567320 MRPS17Q9Y2R5 130 aaKnown RBP4.2□□□□□ -1.74
CDH1-211ENST00000567320 PLEKHM1Q9Y4G2 1056 aa4.2□□□□□ -1.74
CDH1-211ENST00000567320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDH1-211ENST00000567320 MYMKA6NI61 221 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 USP1O94782 785 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 IL1R2P27930 398 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 TKTP29401 623 aaKnown RBP4.19□□□□□ -1.74
CDH1-211ENST00000567320 NR4A2P43354 598 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 ALDH5A1P51649 535 aaPredicted RBP4.19□□□□□ -1.74
CDH1-211ENST00000567320 ZNF268Q14587 947 aaPredicted RBP4.19□□□□□ -1.74
CDH1-211ENST00000567320 GPR162Q16538 588 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 Q4G0T1 1027 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 KIRREL2Q6UWL6 708 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 TERB1Q8NA31 727 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 OSCP1Q8WVF1 389 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 RITA1Q96K30 269 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 CIPCQ9C0C6 399 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 ARMT1Q9H993 441 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 XPR1Q9UBH6 696 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 TMX2Q9Y320 296 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 LUC7L2Q9Y383 392 aaKnown RBP4.19□□□□□ -1.74
CDH1-211ENST00000567320 SPEF1Q9Y4P9 236 aa4.19□□□□□ -1.74
CDH1-211ENST00000567320 AP4M1O00189 453 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 DSCR3O14972 297 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 KCNAB3O43448 404 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 GCATO75600 419 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 NTN1O95631 604 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 POU2F2P09086 479 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 SCP2P22307 547 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 PDE6CP51160 858 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 PRKAG1P54619 331 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 DAZAP2Q15038 168 aaPredicted RBP4.18□□□□□ -1.74
CDH1-211ENST00000567320 SHC4Q6S5L8 630 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 PRR18Q8N4B5 295 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 CUL5Q93034 780 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 HSPBAP1Q96EW2 488 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 CDK5RAP3Q96JB5 506 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 FAM118BQ9BPY3 351 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 TRMT13Q9NUP7 481 aaKnown RBP4.18□□□□□ -1.74
CDH1-211ENST00000567320 WASHC2CQ9Y4E1 1318 aa4.18□□□□□ -1.74
CDH1-211ENST00000567320 H3BNC9 293 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 H7C1Q1 480 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 SOCS2O14508 198 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 ADAMTS3O15072 1205 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 CHRM5P08912 532 aaPredicted RBP4.17□□□□□ -1.74
CDH1-211ENST00000567320 CBSLP0DN79 551 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 CYP2A6P11509 494 aaPredicted RBP4.17□□□□□ -1.74
CDH1-211ENST00000567320 ADORA2AP29274 412 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 LRPAP1P30533 357 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 CBSP35520 551 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 RENBPP51606 427 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 UCP3P55916 312 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 AMPD3Q01432 767 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 LAMB3Q13751 1172 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 MRPL10Q7Z7H8 261 aaKnown RBP4.17□□□□□ -1.74
CDH1-211ENST00000567320 CAND1Q86VP6 1230 aaKnown RBP4.17□□□□□ -1.74
CDH1-211ENST00000567320 GRAMD1CQ8IYS0 662 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 MVB12AQ96EY5 273 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 SNX18Q96RF0 628 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 KRTAP1-5Q9BYS1 174 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 GTPBP4Q9BZE4 634 aaKnown RBP4.17□□□□□ -1.74
CDH1-211ENST00000567320 AFG3L2Q9Y4W6 797 aa4.17□□□□□ -1.74
CDH1-211ENST00000567320 SBNO2Q9Y2G9 1366 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 TMEM232C9JQI7 657 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 PSMD9O00233 223 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 INSIG1O15503 277 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 VNN1O95497 513 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 PRKCBP05771 671 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 FPR3P25089 353 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 VIPR2P41587 438 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 FOXG1P55316 489 aaPredicted RBP4.16□□□□□ -1.74
CDH1-211ENST00000567320 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
CDH1-211ENST00000567320 E2F1Q01094 437 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 MYO1EQ12965 1108 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 LY6KQ17RY6 165 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 MGAT5BQ3V5L5 792 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 EMC10Q5UCC4 262 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 RUSC1-AS1Q66K80 236 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 MTHFD1LQ6UB35 978 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 ZNF517Q6ZMY9 492 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms