RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ZNF518BQ9C0D4 1074 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 WDR6Q9NNW5 1121 aaKnown RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 KRT82Q9NSB4 513 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 UXTQ9UBK9 157 aaPredicted RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 HESX1Q9UBX0 185 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 PRKAG3Q9UGI9 489 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 NR2E1Q9Y466 385 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
SF3B3-208ENST00000567250 UNC80Q8N2C7 3258 aa12.92□□□□□ -0.34
SF3B3-208ENST00000567250 NUP210Q8TEM1 1887 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-208ENST00000567250 ZNF197O14709 1029 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 AP1G2O75843 785 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 VDRP11473 427 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 CCDC130P13994 396 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 IL9P15248 144 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 UCHL3P15374 230 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
SF3B3-208ENST00000567250 ADORA2BP29275 332 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 KCNQ1P51787 676 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 FANCCQ00597 558 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 KCNMA1Q12791 1236 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 SYCP1Q15431 976 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 ARHGAP44Q17R89 818 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 CYP4A22Q5TCH4 519 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 KLHDC7AQ5VTJ3 777 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 ARHGAP17Q68EM7 881 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-208ENST00000567250 FMNL3Q8IVF7 1028 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 SHC3Q92529 594 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 CYFIP2Q96F07 1278 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 SPATA17Q96L03 361 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 C8orf48Q96LL4 319 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 KREMEN1Q96MU8 473 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 HNRNPABQ99729 332 aaKnown RBP12.91□□□□□ -0.34
SF3B3-208ENST00000567250 PHF7Q9BWX1 381 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-208ENST00000567250 B3GNT5Q9BYG0 378 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 POMKQ9H5K3 350 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 SIX2Q9NPC8 291 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 AVENQ9NQS1 362 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-208ENST00000567250 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 CNTN6Q9UQ52 1028 aa12.91□□□□□ -0.34
SF3B3-208ENST00000567250 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 F8VP50 259 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 MED7O43513 233 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 SOAT2O75908 522 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 RHOP08100 348 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 NPR3P17342 541 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 FSHRP23945 695 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 USP8P40818 1118 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 ZNF132P52740 706 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 BCAT1P54687 386 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 PPP1R26Q5T8A7 1209 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 GJB7Q6PEY0 223 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 DENND5BQ6ZUT9 1274 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 FUKQ8N0W3 1084 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 C12orf29Q8N999 325 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 RNF214Q8ND24 703 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 TRMT2BQ96GJ1 504 aaKnown RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 SPAG5Q96R06 1193 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 LPIN3Q9BQK8 851 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 CEP72Q9P209 647 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 USTQ9Y2C2 406 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 SIK3Q9Y2K2 1263 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 FHOD1Q9Y613 1164 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.34
SF3B3-208ENST00000567250 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
SF3B3-208ENST00000567250 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 CLDN5O00501 218 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 RTN3O95197 1032 aaPredicted RBP12.89□□□□□ -0.35
SF3B3-208ENST00000567250 CDC25CP30307 473 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 GNA15P30679 374 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 CDR1P51861 262 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 EPHA5P54756 1037 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 UBASH3AP57075 661 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 BPIFB4P59827 614 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 PTK2Q05397 1052 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 MEA1Q16626 185 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 DDR2Q16832 855 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 CACNA2D4Q7Z3S7 1137 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 TDRD5Q8NAT2 981 aaKnown RBP12.89□□□□□ -0.35
SF3B3-208ENST00000567250 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 IQCDQ96DY2 449 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 STK33Q9BYT3 514 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 GANQ9H2C0 597 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 CSNK1G1Q9HCP0 422 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 HCFC1R1Q9NWW0 138 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.35
SF3B3-208ENST00000567250 ZMYM5Q9UJ78 669 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 TSPAN16Q9UKR8 245 aa12.89□□□□□ -0.35
SF3B3-208ENST00000567250 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms