RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 UNC93AQ86WB7 457 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 SH2D3CQ8N5H7 860 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 ARFGAP2Q8N6H7 521 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
DCAF11-227ENST00000560046 HEXIM2Q96MH2 286 aaKnown RBP11.19□□□□□ -0.62
DCAF11-227ENST00000560046 ZMAT2Q96NC0 199 aaKnown RBP11.19□□□□□ -0.62
DCAF11-227ENST00000560046 OSMRQ99650 979 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 FRMD8P1Q9BZ68 369 aaPredicted RBP11.19□□□□□ -0.62
DCAF11-227ENST00000560046 FOXP3Q9BZS1 431 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 TSPYL1Q9H0U9 437 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 CXCL16Q9H2A7 254 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
DCAF11-227ENST00000560046 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
DCAF11-227ENST00000560046 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 C17orf102A2RUQ5 167 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 ERICH4A6NGS2 130 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 PI4K2BG5E9Z4 385 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 PIRO00625 290 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 DPYSL4O14531 572 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 PPEF2O14830 753 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 TREHO43280 583 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 KPNA6O60684 536 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 LRCH4O75427 683 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 KRT7P08729 469 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 CYP2B6P20813 491 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 KLRC2P26717 231 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 PCK1P35558 622 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 GJC1P36383 396 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 SP3Q02447 781 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 TMEM62Q0P6H9 643 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 ORC1Q13415 861 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 LLGL1Q15334 1064 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 HADHQ16836 314 aaKnown RBP11.18□□□□□ -0.62
DCAF11-227ENST00000560046 KCTD19Q17RG1 926 aaPredicted RBP11.18□□□□□ -0.62
DCAF11-227ENST00000560046 KRT71Q3SY84 523 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 TFDP3Q5H9I0 405 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 C9orf57Q5W0N0 161 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 TXNRD3NBQ6F5E7 133 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 HOOK3Q86VS8 718 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 CCHCR1Q8TD31 782 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
DCAF11-227ENST00000560046 DNAJB3Q8WWF6 145 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 RAPGEF5Q92565 580 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 LENG1Q96BZ8 264 aaPredicted RBP11.18□□□□□ -0.62
DCAF11-227ENST00000560046 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
DCAF11-227ENST00000560046 ZFYVE28Q9HCC9 887 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 METTL5Q9NRN9 209 aaKnown RBP11.18□□□□□ -0.62
DCAF11-227ENST00000560046 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 PTCH2Q9Y6C5 1203 aa11.18□□□□□ -0.62
DCAF11-227ENST00000560046 EIF3HO15372 352 aaKnown RBP eCLIP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 RIPK2O43353 540 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 XPOTO43592 962 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 DUSP11O75319 330 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 RECQL4O94761 1208 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ENDOD1O94919 500 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 TRUB2O95900 331 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 CD4P01730 458 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 IVLP07476 585 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 FAM163BP0C2L3 166 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 GNAT1P11488 350 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ATF2P15336 505 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ATF7P17544 494 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 KDELR1P24390 212 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ZNF143P52747 638 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ITGA8P53708 1063 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 VCPP55072 806 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 GNGT1P63211 74 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 NKX3-2P78367 333 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 PURAQ00577 322 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 BEX3Q00994 111 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ADCY2Q08462 1091 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ARHGEF6Q15052 776 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 OASLQ15646 514 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 FSCN1Q16658 493 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 GOLGA7BQ2TAP0 167 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 DENND2CQ68D51 928 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 BBS12Q6ZW61 710 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 UBE2Q1Q7Z7E8 422 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 RELL1Q8IUW5 271 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 CCDC89Q8N998 374 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 CMASQ8NFW8 434 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 SLC35B2Q8TB61 432 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 STK32AQ8WU08 396 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 TMEM40Q8WWA1 233 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 C18orf25Q96B23 403 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 PGM2Q96G03 612 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 MRPL45Q9BRJ2 306 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 TRAIPQ9BWF2 469 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ROPN1BQ9BZX4 212 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 SEMA4AQ9H3S1 761 aa11.17□□□□□ -0.62
DCAF11-227ENST00000560046 NXF3Q9H4D5 531 aaKnown RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ROPN1Q9HAT0 212 aaPredicted RBP11.17□□□□□ -0.62
DCAF11-227ENST00000560046 ASNSD1Q9NWL6 643 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms