RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ZNF513Q8N8E2 541 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 KIFAP3Q92845 792 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 ACO2Q99798 780 aaKnown RBP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 NXF1Q9UBU9 619 aaKnown RBP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 DSEQ9UL01 958 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 NID2Q14112 1375 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 MUC22E2RYF6 1773 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 CCDC169A6NNP5 214 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 TLX3O43711 291 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 DKK1O94907 266 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 HAPLN1P10915 354 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 GABRG2P18507 467 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 CYP11B2P19099 503 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 PAX3P23760 479 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 MAOBP27338 520 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 LRPAP1P30533 357 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 GRIA2P42262 883 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 TNFRSF4P43489 277 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 UCNP55089 124 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 CCDC173Q0VFZ6 552 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 PADI6Q6TGC4 694 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 MPZL3Q6UWV2 235 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 PIK3AP1Q6ZUJ8 805 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 TMEM150AQ86TG1 271 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 DCP1BQ8IZD4 617 aaKnown RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 ZCCHC9Q8N567 271 aaKnown RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 SNIP1Q8TAD8 396 aaKnown RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 BAHD1Q8TBE0 780 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 LGMNQ99538 433 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 ESYT1Q9BSJ8 1104 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 IL21RQ9HBE5 538 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 ZDHHC4Q9NPG8 344 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 UBQLN1Q9UMX0 589 aaKnown RBP10.46□□□□□ -0.73
SMAD3-211ENST00000559460 PCDHGB2Q9Y5G2 931 aa10.46□□□□□ -0.73
SMAD3-211ENST00000559460 CELSR3Q9NYQ7 3312 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 PLXND1Q9Y4D7 1925 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 TBC1D3BA6NDS4 549 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ANTXRLA6NF34 631 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 SLC9A3R1O14745 358 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 PRPF40AO75400 957 aaKnown RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ADH1CP00326 375 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ACTN2P35609 894 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 TXKP42681 527 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 GRK6P43250 576 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 AARSP49588 968 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 TMPRSS3P57727 454 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 RPL10AP62906 217 aaKnown RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 NOLC1Q14978 699 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 NTRK3Q16288 839 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 HLA-BQ31612 363 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ADCK5Q3MIX3 580 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 EMC10Q5UCC4 262 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 BTBD8Q5XKL5 378 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ARL14EPQ8N8R7 260 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 OR10T2Q8NGX3 314 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 FGF11Q92914 225 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 TMEM176AQ96HP8 235 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ZNF419Q96HQ0 510 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 CYP2S1Q96SQ9 504 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 TARS2Q9BW92 718 aaKnown RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 FAM117AQ9C073 453 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ZCWPW1Q9H0M4 648 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 LINC00597Q9H2U6 94 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 TUFT1Q9NNX1 390 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 FTSJ1Q9UET6 329 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 FNDC3AQ9Y2H6 1198 aaKnown RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 PCDHB5Q9Y5E4 795 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 KALRNO60229 2985 aa10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ZNF638Q14966 1978 aaKnown RBP10.45□□□□□ -0.74
SMAD3-211ENST00000559460 ADAM23O75077 832 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 CYP17A1P05093 508 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 CDK4P11802 303 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 HMGA1P17096 107 aaKnown RBP10.44□□□□□ -0.74
SMAD3-211ENST00000559460 HDCP19113 662 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 CYP3A5P20815 502 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 KIR2DL1P43626 348 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-211ENST00000559460 TLE3Q04726 772 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 SPAG1Q07617 926 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 KCNH2Q12809 1159 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 STRN3Q13033 797 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 LY6DQ14210 128 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 BLOC1S2Q6QNY1 142 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 PCSK4Q6UW60 755 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 KIAA1324Q6UXG2 1013 aaKnown RBP10.44□□□□□ -0.74
SMAD3-211ENST00000559460 ERMNQ8TAM6 284 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 KCNV2Q8TDN2 545 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 SENP8Q96LD8 212 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 NRSN2Q9GZP1 204 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 PLEKHA5Q9HAU0 1116 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 NCOA5Q9HCD5 579 aaKnown RBP10.44□□□□□ -0.74
SMAD3-211ENST00000559460 KCNJ14Q9UNX9 436 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 PTPRDP23468 1912 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 UNC79Q9P2D8 2635 aa10.44□□□□□ -0.74
SMAD3-211ENST00000559460 TRIP11Q15643 1979 aa10.43□□□□□ -0.74
SMAD3-211ENST00000559460 BTBD18B2RXH4 712 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms