RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 IDEP14735 1019 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 KCNA3P22001 575 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 GATA3P23771 443 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 GABRB3P28472 473 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 PPIFP30405 207 aaKnown RBP4.47□□□□□ -1.69
GPHN-214ENST00000556633 BMPR1AP36894 532 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 COPAP53621 1224 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 PRKAG1P54619 331 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 ADAM17P78536 824 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 ICA1Q05084 483 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 KCNAB1Q14722 419 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 PUM3Q15397 648 aaKnown RBP4.47□□□□□ -1.69
GPHN-214ENST00000556633 ELF2Q15723 593 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 TUBB8Q3ZCM7 444 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 VPS53Q5VIR6 699 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
GPHN-214ENST00000556633 CCDC174Q6PII3 467 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 KRT28Q7Z3Y7 464 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 GLIS1Q8NBF1 620 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 PPP2R3CQ969Q6 453 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 MYEOVQ96EZ4 313 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 PLEKHG4BQ96PX9 1271 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 GDF15Q99988 308 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 C1QTNF3Q9BXJ4 246 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.47□□□□□ -1.69
GPHN-214ENST00000556633 DNMT3BQ9UBC3 853 aaKnown RBP4.47□□□□□ -1.69
GPHN-214ENST00000556633 DKK4Q9UBT3 224 aa4.47□□□□□ -1.69
GPHN-214ENST00000556633 FER1L4A9Z1Z3 1794 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SRGAP2O75044 1071 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SKAP2O75563 359 aaPredicted RBP4.46□□□□□ -1.7
GPHN-214ENST00000556633 SPDEFO95238 335 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 CHKAP35790 457 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 GUCY1B3Q02153 619 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 EFEMP1Q12805 493 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 BLMHQ13867 455 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 E2F2Q14209 437 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 ZRSR2Q15696 482 aaKnown RBP4.46□□□□□ -1.7
GPHN-214ENST00000556633 RAB30Q15771 203 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 PDCD2Q16342 344 aaPredicted RBP4.46□□□□□ -1.7
GPHN-214ENST00000556633 ZNF750Q32MQ0 723 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 PTCHD3Q3KNS1 767 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 TIGD2Q4W5G0 525 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 ICE2Q659A1 982 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SFRP4Q6FHJ7 346 aaPredicted RBP4.46□□□□□ -1.7
GPHN-214ENST00000556633 CRTC1Q6UUV9 634 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SLC15A3Q8IY34 581 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SPARTQ8N0X7 666 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 CYP2W1Q8TAV3 490 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 DNAJB14Q8TBM8 379 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 CACTINQ8WUQ7 758 aaKnown RBP4.46□□□□□ -1.7
GPHN-214ENST00000556633 TMEM171Q8WVE6 324 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 FAM136AQ96C01 138 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SNX27Q96L92 541 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 OSBPL9Q96SU4 736 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 NELL2Q99435 816 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 TPSD1Q9BZJ3 242 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 FAM83DQ9H4H8 585 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 GBA2Q9HCG7 927 aaPredicted RBP4.46□□□□□ -1.7
GPHN-214ENST00000556633 TM7SF3Q9NS93 570 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 RGL1Q9NZL6 768 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 SERTAD3Q9UJW9 196 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 CAPN11Q9UMQ6 739 aa4.46□□□□□ -1.7
GPHN-214ENST00000556633 hCG_1642624A0A1W2PR95 340 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 GOLGA6L3A6NEY3 463 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 TMEM200CA6NKL6 621 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 LPXNO60711 386 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 CSF1RP07333 972 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 PPP3CBP16298 524 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 PDIA3P30101 505 aaKnown RBP4.45□□□□□ -1.7
GPHN-214ENST00000556633 ATICP31939 592 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 HALP42357 657 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 TP53BP2Q13625 1128 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 SPATS1Q496A3 300 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 CCDC38Q502W7 563 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 INO80DQ53TQ3 878 aaPredicted RBP4.45□□□□□ -1.7
GPHN-214ENST00000556633 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 SYNE4Q8N205 404 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 FAM109AQ8N4B1 249 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 ANKRD42Q8N9B4 389 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 SLC30A5Q8TAD4 765 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 IPO4Q8TEX9 1081 aaKnown RBP4.45□□□□□ -1.7
GPHN-214ENST00000556633 PTCD3Q96EY7 689 aaKnown RBP4.45□□□□□ -1.7
GPHN-214ENST00000556633 HERPUD2Q9BSE4 406 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 NECTIN3Q9NQS3 549 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 DKK2Q9UBU2 259 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 ZMYND8Q9ULU4 1186 aaPredicted RBP4.45□□□□□ -1.7
GPHN-214ENST00000556633 FZD1Q9UP38 647 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 HPSEQ9Y251 543 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 SSX2IPQ9Y2D8 614 aa4.45□□□□□ -1.7
GPHN-214ENST00000556633 MORC2Q9Y6X9 1032 aaPredicted RBP4.45□□□□□ -1.7
GPHN-214ENST00000556633 CENPVL1A0A0U1RR11 272 aa4.44□□□□□ -1.7
GPHN-214ENST00000556633 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
GPHN-214ENST00000556633 KCNQ3O43525 872 aa4.44□□□□□ -1.7
GPHN-214ENST00000556633 PIP5K1CO60331 668 aa4.44□□□□□ -1.7
GPHN-214ENST00000556633 PPFIA4O75335 1185 aa4.44□□□□□ -1.7
GPHN-214ENST00000556633 PEX11BO96011 259 aa4.44□□□□□ -1.7
GPHN-214ENST00000556633 CSTBP04080 98 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms