RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 C4BPAP04003 597 aaKnown RBP11.88□□□□□ -0.51
ABCD4-221ENST00000554453 PFKFB1P16118 471 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 PTPN1P18031 435 aaKnown RBP11.88□□□□□ -0.51
ABCD4-221ENST00000554453 BDNFP23560 247 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 CCR3P51677 355 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 MYL6P60660 151 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 KRT85P78386 507 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 TNK2Q07912 1038 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 RUNX3Q13761 415 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 LRRC32Q14392 662 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 GAS6Q14393 721 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 PPP2R5DQ14738 602 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 CCDC142Q17RM4 750 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 WDR44Q5JSH3 913 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 TSSK4Q6SA08 328 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 SYNPOQ8N3V7 929 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 OR6B3Q8NGW1 331 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 TTC8Q8TAM2 541 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 PLEKHO2Q8TD55 490 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 CYP2S1Q96SQ9 504 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 MRPL45Q9BRJ2 306 aaKnown RBP11.88□□□□□ -0.51
ABCD4-221ENST00000554453 XYLT2Q9H1B5 865 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 SNX25Q9H3E2 840 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 KCTD10Q9H3F6 313 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 VRTNQ9H8Y1 702 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 GCNT4Q9P109 453 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 CCL26Q9Y258 94 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 NME7Q9Y5B8 376 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 CFAP54Q96N23 3096 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 SPAG17Q6Q759 2223 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 VPS13AQ96RL7 3174 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 COL4A2P08572 1712 aa11.88□□□□□ -0.51
ABCD4-221ENST00000554453 RALGAPA1Q6GYQ0 2036 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 KIF26AQ9ULI4 1882 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-221ENST00000554453 TRDMT1O14717 391 aaKnown RBP11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PHACTR2O75167 634 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 TADA3O75528 432 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PAPSS2O95340 614 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-221ENST00000554453 USP17L7P0C7H9 530 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 TCF3P15923 654 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PFKLP17858 780 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 HDCP19113 662 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 GRIK1P39086 918 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
ABCD4-221ENST00000554453 FAM160A1Q05DH4 1040 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PON2Q15165 354 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 FSIP1Q8NA03 581 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PCED1BQ96HM7 432 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 C8orf48Q96LL4 319 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 RBM12Q9NTZ6 932 aaKnown RBP11.87□□□□□ -0.51
ABCD4-221ENST00000554453 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 PTPRDP23468 1912 aa11.87□□□□□ -0.51
ABCD4-221ENST00000554453 USP34Q70CQ2 3546 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 TRAV19A0A0A6YYK7 116 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 OTOL1A6NHN0 477 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-221ENST00000554453 IKBKBO14920 756 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 TRIM66O15016 1216 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
ABCD4-221ENST00000554453 HOXA6P31267 233 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 SYKP43405 635 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 PPP3CCP48454 512 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 CASP4P49662 377 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 TNNC1P63316 161 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 AMPD2Q01433 879 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 CYP27A1Q02318 531 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 CCINQ13939 588 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 TMEM196Q5HYL7 178 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 CC2D1AQ6P1N0 951 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-221ENST00000554453 DENND5BQ6ZUT9 1274 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 DCLK2Q8N568 766 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 ARL14EPQ8N8R7 260 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-221ENST00000554453 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 MYLPFQ96A32 169 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 SLC22A12Q96S37 553 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 TTLL2Q9BWV7 592 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
ABCD4-221ENST00000554453 EPC1Q9H2F5 836 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 EBF3Q9H4W6 596 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 EHD2Q9NZN4 543 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
ABCD4-221ENST00000554453 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 OBSL1O75147 1896 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 MYH10P35580 1976 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 SPTBN2O15020 2390 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 ZNF292O60281 2723 aa11.86□□□□□ -0.51
ABCD4-221ENST00000554453 CNOT1A5YKK6 2376 aaKnown RBP11.85□□□□□ -0.51
ABCD4-221ENST00000554453 C2orf78A6NCI8 922 aa11.85□□□□□ -0.51
ABCD4-221ENST00000554453 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms