RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 KBTBD7Q8WVZ9 684 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 MYLPFQ96A32 169 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 PAGE5Q96GU1 130 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 C8orf48Q96LL4 319 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 NCDNQ9UBB6 729 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
VTI1BP3-201ENST00000550220 NCANO14594 1321 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 PTPRJQ12913 1337 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 TRDMT1O14717 391 aaKnown RBP11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 IKBKBO14920 756 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 ACTN4O43707 911 aaKnown RBP11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 PTPN1P18031 435 aaKnown RBP11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 HDCP19113 662 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 BDNFP23560 247 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 GPR15P49685 360 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 CDR1P51861 262 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 CYP27A1Q02318 531 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 BIRC3Q13489 604 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 CCINQ13939 588 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 KCNB1Q14721 858 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 FBXO43Q4G163 708 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 SDHAF4Q5VUM1 108 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 TAF4BQ92750 862 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 PCED1BQ96HM7 432 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 ZFYVE19Q96K21 471 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 ELOVL4Q9GZR5 314 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 SMG9Q9H0W8 520 aaKnown RBP11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 TRPC7Q9HCX4 862 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 CRTAC1Q9NQ79 661 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 DMAC2Q9NW81 257 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 TRPM5Q9NZQ8 1165 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 GMEB2Q9UKD1 530 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 FRMD4BQ9Y2L6 1034 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 DMDP11532 3685 aa11.61□□□□□ -0.55
VTI1BP3-201ENST00000550220 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 A8MXQ7 604 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 MAPK13O15264 365 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 CALUO43852 315 aaPredicted RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 KLRC4O43908 158 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 ATP2C2O75185 946 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 CKMP06732 381 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TDGF1P13385 188 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TCF3P15923 654 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 PFKFB1P16118 471 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 DRD1P21728 446 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 CASP1P29466 404 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 SYKP43405 635 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 SOX9P48436 509 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 MYL6P60660 151 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 PSMC1P62191 440 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 NOP14P78316 857 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TNK2Q07912 1038 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 STK4Q13043 487 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 PKP1Q13835 747 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 MTF1Q14872 753 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 PON2Q15165 354 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 SGSM1Q2NKQ1 1148 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 KMT5BQ4FZB7 885 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 ZNF667Q5HYK9 610 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TMEM196Q5HYL7 178 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 SCARA3Q6AZY7 606 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TSSK4Q6SA08 328 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TTC8Q8TAM2 541 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 OSCP1Q8WVF1 389 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 ZNF516Q92618 1163 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 ATP2A3Q93084 1043 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TNIP3Q96KP6 325 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 SLITRK1Q96PX8 696 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 MRPL45Q9BRJ2 306 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 TTLL2Q9BWV7 592 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 DUS2Q9NX74 493 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 NXF1Q9UBU9 619 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 ARHGAP26Q9UNA1 814 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 SMG5Q9UPR3 1016 aaKnown RBP11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 HPSEQ9Y251 543 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 CCL26Q9Y258 94 aa11.6□□□□□ -0.55
VTI1BP3-201ENST00000550220 OTOGLQ3ZCN5 2332 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 GPR179Q6PRD1 2367 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 CCDC163A0A0D9SF12 145 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 FAM237AA0A1B0GTK4 181 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 A0A1W2PQ27 194 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 A0A1W2PQ64 194 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 A0A1W2PQD8 194 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 PRR5-ARHGAP8B1AHC4 643 aa11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 SLC9A3R1O14745 358 aaPredicted RBP11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 FOXD2O60548 495 aaPredicted RBP11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 RTN3O95197 1032 aaPredicted RBP11.59□□□□□ -0.55
VTI1BP3-201ENST00000550220 C4BPAP04003 597 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms