RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PKN3Q6P5Z2 889 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 C12orf56Q8IXR9 622 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 SYNPOQ8N3V7 929 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 XXYLT1Q8NBI6 393 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 RDH13Q8NBN7 331 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 SECISBP2LQ93073 1101 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 TRPC7Q9HCX4 862 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 PARD6AQ9NPB6 346 aa18.61■□□□□ 0.57
CHMP1A-205ENST00000548650 PDIA4P13667 645 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 TGM1P22735 817 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 HOXC13P31276 330 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 ME1P48163 572 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 SNRPFP62306 86 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 FAM160A1Q05DH4 1040 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 CUL4BQ13620 913 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 PUM1Q14671 1186 aaKnown RBP eCLIP18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 MTF1Q14872 753 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 LPAL2Q16609 132 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 LAIR1Q6GTX8 287 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 VSTM1Q6UX27 236 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 HS2ST1Q7LGA3 356 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 GPR161Q8N6U8 529 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 CCDC127Q96BQ5 260 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 PCED1BQ96HM7 432 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 SPATA17Q96L03 361 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 FNBP1Q96RU3 617 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 MRPL45Q9BRJ2 306 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 FAM13BQ9NYF5 915 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 GCNT4Q9P109 453 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 GMEB2Q9UKD1 530 aa18.6■□□□□ 0.57
CHMP1A-205ENST00000548650 TRAV19A0A0A6YYK7 116 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 PVALEFA0A1B0GWK0 134 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 C2orf78A6NCI8 922 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 TACC1O75410 805 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 CST3P01034 146 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 CKMP06732 381 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 HSP90AA1P07900 732 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 USP17L7P0C7H9 530 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 TNNI1P19237 187 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 HOXA6P31267 233 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 AFMP43652 599 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 SRSF5Q13243 272 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 PDGFRLQ15198 375 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 MAPRE1Q15691 268 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 DGLUCYQ7Z3D6 616 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 LONP2Q86WA8 852 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 GRAMD1CQ8IYS0 662 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 MMS19Q96T76 1030 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 SLC39A2Q9NP94 309 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 RAB23Q9ULC3 237 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 RALGAPA1Q6GYQ0 2036 aa18.59■□□□□ 0.57
CHMP1A-205ENST00000548650 TRDMT1O14717 391 aaKnown RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 HRO43593 1189 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 STAU1O95793 577 aaKnown RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 PDGFRBP09619 1106 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 BDNFP23560 247 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 USP46P62068 366 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 CYP27A1Q02318 531 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 LMNB2Q03252 620 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 DNM1Q05193 864 aaKnown RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 RSPO4Q2I0M5 234 aaPredicted RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 MDH1BQ5I0G3 518 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 NAIF1Q69YI7 327 aaPredicted RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 HEATR6Q6AI08 1181 aaKnown RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 ATL3Q6DD88 541 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 CC2D1AQ6P1N0 951 aaPredicted RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 PRR23BQ6ZRT6 265 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 ARL14EPQ8N8R7 260 aaPredicted RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 MYCBPAPQ8TBZ2 947 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 PLEKHO2Q8TD55 490 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 ZNF516Q92618 1163 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 CEP295NLQ96MC4 621 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 CYP2S1Q96SQ9 504 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 XYLT2Q9H1B5 865 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 CGNQ9P2M7 1197 aaKnown RBP18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 WNT6Q9Y6F9 365 aa18.58■□□□□ 0.56
CHMP1A-205ENST00000548650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 MED19A0JLT2 244 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 ACTN4O43707 911 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 KLRC4O43908 158 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 TCF3P15923 654 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 GRSF1Q12849 480 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 SIM2Q14190 667 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 KCNB1Q14721 858 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 KNOP1Q1ED39 458 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 DENND5BQ6ZUT9 1274 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 CPA6Q8N4T0 437 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 FSIP1Q8NA03 581 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 KIAA0895Q8NCT3 520 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 OSCP1Q8WVF1 389 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 TTLL2Q9BWV7 592 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 DPEP3Q9H4B8 488 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 TMEM30AQ9NV96 361 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 USP18Q9UMW8 372 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 ARHGAP26Q9UNA1 814 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 SPTBN2O15020 2390 aa18.57■□□□□ 0.56
CHMP1A-205ENST00000548650 F8VP50 259 aa18.56■□□□□ 0.56
CHMP1A-205ENST00000548650 TRIM66O15016 1216 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms