RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 COL6A3P12111 3177 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 TULP2O00295 520 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 AP1G2O75843 785 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 C8AP07357 584 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 MMEP08473 750 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 FERP16591 822 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 ELF1P32519 619 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 SMARCB1Q12824 385 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 CNGA2Q16280 664 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 ASIC2Q16515 512 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 DENND1BQ6P3S1 775 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 LCLAT1Q6UWP7 414 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 PASD1Q8IV76 773 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 TCEAL8Q8IYN2 117 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 EFHBQ8N7U6 833 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 TC2NQ8N9U0 490 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 ZMIZ2Q8NF64 920 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 PPM1EQ8WY54 764 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 FUBP3Q96I24 572 aaKnown RBP eCLIP22.05■■□□□ 1.12
OTUB1-211ENST00000543004 CDCA3Q99618 268 aaPredicted RBP22.05■■□□□ 1.12
OTUB1-211ENST00000543004 BRWD1Q9NSI6 2320 aa22.05■■□□□ 1.12
OTUB1-211ENST00000543004 GREB1Q4ZG55 1949 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 PATJQ8NI35 1801 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 AKR1B15C9JRZ8 316 aaPredicted RBP22.04■■□□□ 1.12
OTUB1-211ENST00000543004 F8VP50 259 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 CHRNB2P17787 502 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 ATF6P18850 670 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 PDE6CP51160 858 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 MAP3K7CLP57077 242 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 ARID5BQ14865 1188 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 CLEC20AQ6ZU45 233 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.04■■□□□ 1.12
OTUB1-211ENST00000543004 C12orf76Q8N812 135 aaPredicted RBP22.04■■□□□ 1.12
OTUB1-211ENST00000543004 C2orf15Q8WU43 125 aaKnown RBP22.04■■□□□ 1.12
OTUB1-211ENST00000543004 DNAI2Q9GZS0 605 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 ABCB6Q9NP58 842 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 ABHD10Q9NUJ1 306 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 YIPF1Q9Y548 306 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 INSL5Q9Y5Q6 135 aa22.04■■□□□ 1.12
OTUB1-211ENST00000543004 M0QYV0 167 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 PLEKP08567 350 aaPredicted RBP22.03■■□□□ 1.12
OTUB1-211ENST00000543004 GRIK1P39086 918 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 BPIFB4P59827 614 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 DLX2Q07687 328 aaPredicted RBP22.03■■□□□ 1.12
OTUB1-211ENST00000543004 HGSNATQ68CP4 663 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 WDR59Q6PJI9 974 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 OLIG1Q8TAK6 271 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 GIPC2Q8TF65 315 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 SMARCD1Q96GM5 515 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 DNAJC7Q99615 494 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 DUSP16Q9BY84 665 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 HAUS4Q9H6D7 363 aa22.03■■□□□ 1.12
OTUB1-211ENST00000543004 TPM1P09493 284 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 FAM200BP0CF97 657 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 PDE4CQ08493 712 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 TWF1Q12792 350 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 ADAM15Q13444 863 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 PKDCCQ504Y2 493 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 LIN9Q5TKA1 542 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 EP400NLQ6ZTU2 488 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 ANKRD52Q8NB46 1076 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 OR8K1Q8NGG5 319 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 APOL5Q9BWW9 433 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 PLEKHA4Q9H4M7 779 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 C2orf16Q68DN1 1984 aa22.02■■□□□ 1.12
OTUB1-211ENST00000543004 ZNF638Q14966 1978 aaKnown RBP22.02■■□□□ 1.12
OTUB1-211ENST00000543004 NPR3P17342 541 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 MAGEA11P43364 429 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 FMO1Q01740 532 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 ZNF571Q7Z3V5 609 aaPredicted RBP22.02■■□□□ 1.11
OTUB1-211ENST00000543004 WDTC1Q8N5D0 677 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 SYN2Q92777 582 aaPredicted RBP22.02■■□□□ 1.11
OTUB1-211ENST00000543004 SECISBP2LQ93073 1101 aaKnown RBP22.02■■□□□ 1.11
OTUB1-211ENST00000543004 CSNK1G1Q9HCP0 422 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 CLDND1Q9NY35 253 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 HESX1Q9UBX0 185 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 CYTH4Q9UIA0 394 aa22.02■■□□□ 1.11
OTUB1-211ENST00000543004 MED7O43513 233 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 ATP8B3O60423 1300 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 TBX10O75333 385 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 ZMYND10O75800 440 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 LTBRP36941 435 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 PRKCIP41743 596 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 TUFMP49411 452 aaKnown RBP22.01■■□□□ 1.11
OTUB1-211ENST00000543004 CDR2Q01850 454 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 KLHL30Q0D2K2 578 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 MTMR3Q13615 1198 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 CTC1Q2NKJ3 1217 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 SMYD5Q6GMV2 418 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 VSTM1Q6UX27 236 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 CNGA4Q8IV77 575 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 PCDHB18PQ96TA0 734 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 SYT11Q9BT88 431 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 NUCKS1Q9H1E3 243 aaKnown RBP22.01■■□□□ 1.11
OTUB1-211ENST00000543004 CLEC1BQ9P126 229 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 HSFX1Q9UBD0 423 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 CDH22Q9UJ99 828 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 PCDHGC3Q9UN70 934 aa22.01■■□□□ 1.11
OTUB1-211ENST00000543004 CCL16O15467 120 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 C1RP00736 705 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms