RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GTF3C4Q9UKN8 822 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 ITGA11Q9UKX5 1188 aa28.76■■■□□ 2.19
CHFR-218ENST00000540963 GABRDO14764 452 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 ITGB3P05106 788 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 CEACAM1P13688 526 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 KCNB1Q14721 858 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 UNQ6494/PRO21346Q6UXR6 183 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 SPATA2LQ8IUW3 424 aaPredicted RBP28.75■■■□□ 2.19
CHFR-218ENST00000540963 SH3RF2Q8TEC5 729 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 CNOT6LQ96LI5 555 aaKnown RBP28.75■■■□□ 2.19
CHFR-218ENST00000540963 TMEM9BQ9NQ34 198 aa28.75■■■□□ 2.19
CHFR-218ENST00000540963 ARL14EPQ8N8R7 260 aaPredicted RBP28.74■■■□□ 2.19
CHFR-218ENST00000540963 KDF1Q8NAX2 398 aaPredicted RBP28.74■■■□□ 2.19
CHFR-218ENST00000540963 CXorf38Q8TB03 319 aa28.74■■■□□ 2.19
CHFR-218ENST00000540963 FAM213AQ9BRX8 229 aa28.74■■■□□ 2.19
CHFR-218ENST00000540963 WASF3Q9UPY6 502 aa28.74■■■□□ 2.19
CHFR-218ENST00000540963 PTPRDP23468 1912 aa28.74■■■□□ 2.19
CHFR-218ENST00000540963 HDCP19113 662 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 GJB2P29033 226 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 ZNF252P-AS1Q0IIN9 211 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 FAM171BQ6P995 826 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 DPH6Q7L8W6 267 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 SFR1Q86XK3 245 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 SPATA17Q96L03 361 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 STK17AQ9UEE5 414 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 MMP17Q9ULZ9 603 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 CACNA1GO43497 2377 aa28.73■■■□□ 2.19
CHFR-218ENST00000540963 TMEM8BA6NDV4 472 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 CD2BP2O95400 341 aaKnown RBP28.72■■■□□ 2.19
CHFR-218ENST00000540963 GARTP22102 1010 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 ACAT1P24752 427 aaKnown RBP28.72■■■□□ 2.19
CHFR-218ENST00000540963 SH3PXD2AQ5TCZ1 1133 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 C4orf50Q6ZRC1 276 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 CYP2U1Q7Z449 544 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 ADGRF2Q8IZF7 708 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 CSGALNACT2Q8N6G5 542 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 ACCSQ96QU6 501 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 MRPL44Q9H9J2 332 aaKnown RBP28.72■■■□□ 2.19
CHFR-218ENST00000540963 RBAKQ9NYW8 714 aaPredicted RBP28.72■■■□□ 2.19
CHFR-218ENST00000540963 SNX9Q9Y5X1 595 aa28.72■■■□□ 2.19
CHFR-218ENST00000540963 C2orf78A6NCI8 922 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 K7EQS6 105 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 GIPC1O14908 333 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 GAP43P17677 238 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 OPRD1P41143 372 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 WNT7BP56706 349 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 MRPS21P82921 87 aaKnown RBP28.71■■■□□ 2.19
CHFR-218ENST00000540963 RBP5P82980 135 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 GRIN1Q05586 938 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 RABEP1Q15276 862 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 L1TD1Q5T7N2 865 aaKnown RBP28.71■■■□□ 2.19
CHFR-218ENST00000540963 VSTM1Q6UX27 236 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 IKZF4Q9H2S9 585 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 LINC00597Q9H2U6 94 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 EHD2Q9NZN4 543 aa28.71■■■□□ 2.19
CHFR-218ENST00000540963 EVLQ9UI08 416 aaPredicted RBP28.71■■■□□ 2.19
CHFR-218ENST00000540963 C1QTNF9BB2RNN3 333 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 CDX4O14627 284 aaPredicted RBP28.7■■■□□ 2.18
CHFR-218ENST00000540963 C1QTNF9P0C862 333 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 MAPRE1Q15691 268 aaKnown RBP28.7■■■□□ 2.18
CHFR-218ENST00000540963 CRY1Q16526 586 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 HSF5Q4G112 596 aaPredicted RBP28.7■■■□□ 2.18
CHFR-218ENST00000540963 BRAPQ7Z569 592 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 OSTM1Q86WC4 334 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 SCN4BQ8IWT1 228 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 TTC16Q8NEE8 873 aa28.7■■■□□ 2.18
CHFR-218ENST00000540963 PLXND1Q9Y4D7 1925 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 ALDH1A2O94788 518 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 PPP3CCP48454 512 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 ALCAMQ13740 583 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 SOWAHAQ2M3V2 549 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 C2orf27AQ580R0 203 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 ANO7Q6IWH7 933 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 DYMQ7RTS9 669 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 OLIG1Q8TAK6 271 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 TMX3Q96JJ7 454 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 TPSD1Q9BZJ3 242 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 OLFML3Q9NRN5 406 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 MAGEC2Q9UBF1 373 aaPredicted RBP28.69■■■□□ 2.18
CHFR-218ENST00000540963 ZMIZ1Q9ULJ6 1067 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 PCDHB13Q9Y5F0 798 aa28.69■■■□□ 2.18
CHFR-218ENST00000540963 ZZEF1O43149 2961 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 EIF2DP41214 584 aaKnown RBP28.68■■■□□ 2.18
CHFR-218ENST00000540963 KCNA1Q09470 495 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 LMAN2Q12907 356 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 FOXC1Q12948 553 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 MYO1EQ12965 1108 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 LIMS2Q7Z4I7 341 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 MDGA1Q8NFP4 955 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 SAAL1Q96ER3 474 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 TMEM121BQ9BXQ6 578 aaPredicted RBP28.68■■■□□ 2.18
CHFR-218ENST00000540963 ADAM33Q9BZ11 813 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 CCDC39Q9UFE4 941 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 CDH9Q9ULB4 789 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 INVSQ9Y283 1065 aa28.68■■■□□ 2.18
CHFR-218ENST00000540963 TNRC6BQ9UPQ9 1833 aaKnown RBP28.67■■■□□ 2.18
CHFR-218ENST00000540963 KRT19P08727 400 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 DPP6P42658 865 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 SLC7A9P82251 487 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 SF3A1Q15459 793 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms