RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SCUBE1Q8IWY4 988 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 GPATCH2LQ9NWQ4 482 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 ZBED1O96006 694 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 FGFR1P11362 822 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 MYL6P60660 151 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 ASPHQ12797 758 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 TRIM72Q6ZMU5 477 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 TMC2Q8TDI7 906 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 ZNF516Q92618 1163 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 E2F7Q96AV8 911 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 FOXP3Q9BZS1 431 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 SEPT10Q9P0V9 454 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 ALOX15BO15296 676 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 CCNE2O96020 404 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 CD48P09326 243 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 RFC1P35251 1148 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-232ENST00000535094 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 CDK16Q00536 496 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 CCDC15Q0P6D6 951 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 MOGSQ13724 837 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 PSMD6Q15008 389 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 PCGF5Q86SE9 256 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 SYTL5Q8TDW5 730 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-232ENST00000535094 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
MCF2L-232ENST00000535094 NEK3P51956 506 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 MRPS9P82933 396 aaKnown RBP16.61■□□□□ 0.25
MCF2L-232ENST00000535094 FAM102AQ5T9C2 384 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-232ENST00000535094 SRPK1Q96SB4 655 aaKnown RBP16.61■□□□□ 0.25
MCF2L-232ENST00000535094 PCDH9Q9HC56 1237 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 SHOC2Q9UQ13 582 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 ATP8B3O60423 1300 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 INO80B-WBP1J3KQ70 363 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 ROR1Q01973 937 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 MMRN1Q13201 1228 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 TRIP10Q15642 601 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 ZNF699Q32M78 642 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 TNFAIP8L3Q5GJ75 292 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 ATG16L1Q676U5 607 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 IRGCQ6NXR0 463 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 MON1BQ7L1V2 547 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 KCTD17Q8N5Z5 321 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 RNF217Q8TC41 542 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 DEPDC1BQ8WUY9 529 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 MASTLQ96GX5 879 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 ZNF184Q99676 751 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-232ENST00000535094 INO80BQ9C086 356 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-232ENST00000535094 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 MAGEA13PA6NCF6 341 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 EXTL3O43909 919 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 SLC25A3Q00325 362 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 CUL3Q13618 768 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 SGSM1Q2NKQ1 1148 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 WDR72Q3MJ13 1102 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 LRRC23Q53EV4 343 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-232ENST00000535094 C16orf46Q6P387 395 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 LRRC42Q9Y546 428 aa16.61■□□□□ 0.25
MCF2L-232ENST00000535094 PRPF4O43172 522 aaKnown RBP eCLIP16.6■□□□□ 0.253e-6■■■□□ 15.4
MCF2L-232ENST00000535094 WFS1O76024 890 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 PSAPP07602 524 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ACADSP16219 412 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 GPX6P59796 221 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 BTKQ06187 659 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 UBAP2LQ14157 1087 aaKnown RBP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 DACT2Q5SW24 774 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 APOBEC3GQ9HC16 384 aaKnown RBP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 CSDE1O75534 798 aaKnown RBP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ZMPSTE24O75844 475 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 NR3C2P08235 984 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ABHD2P08910 425 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 KLRC2P26717 231 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 CDH8P55286 799 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 UBA3Q8TBC4 463 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 NMD3Q96D46 503 aaKnown RBP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 IDI2Q9BXS1 227 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 SAR1AQ9NR31 198 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 RGS7P49802 495 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 BST1Q10588 318 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 RIPOR1Q6ZS17 1223 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ZNF677Q86XU0 584 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 C4orf19Q8IY42 314 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ST13P4Q8IZP2 240 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 SLCO2A1Q92959 643 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 NLRP4Q96MN2 994 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 WWP1Q9H0M0 922 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 TJP2Q9UDY2 1190 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
MCF2L-232ENST00000535094 RABGEF1Q9UJ41 708 aa16.6■□□□□ 0.25
MCF2L-232ENST00000535094 ADRA2BP18089 450 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 GNAZP19086 355 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 HIC1Q14526 733 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 TAF5Q15542 800 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 RNASEH2BQ5TBB1 312 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms