RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	CYP2C9	P11712	490 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	PPP3CB	P16298	524 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	PEX2	P28328	305 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	NEK3	P51956	506 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	ZNF134	P52741	427 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	SUMO3	P55854	103 aa	Predicted RBP	4.23	□□□□□ -1.73
RDX-215	ENST00000533961	UCP3	P55916	312 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	MAP9	Q49MG5	647 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	HSP90AB2P	Q58FF8	381 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	ZNF618	Q5T7W0	954 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	RNF220	Q5VTB9	566 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	MAEA	Q7L5Y9	396 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	ZNF804A	Q7Z570	1209 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.23	□□□□□ -1.73
RDX-215	ENST00000533961	USP37	Q86T82	979 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	PEG10	Q86TG7	708 aa	Known RBP	4.23	□□□□□ -1.73
RDX-215	ENST00000533961	LIX1L	Q8IVB5	337 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	MPP5	Q8N3R9	675 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	FAM109A	Q8N4B1	249 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	PSD4	Q8NDX1	1056 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	RAPGEF4	Q8WZA2	1011 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	LPIN2	Q92539	896 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	SEMA4C	Q9C0C4	833 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	KLK15	Q9H2R5	256 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	SARS2	Q9NP81	518 aa	Known RBP	4.23	□□□□□ -1.73
RDX-215	ENST00000533961	GJB4	Q9NTQ9	266 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	WNT6	Q9Y6F9	365 aa		4.23	□□□□□ -1.73
RDX-215	ENST00000533961	FAM227A	F5H4B4	570 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	hCG_1984214	I3L0E3	225 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	KPNA5	O15131	536 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	PMM2	O15305	246 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	PRC1	O43663	620 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	BMP15	O95972	392 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	GRP	P07492	148 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	ATXN1L	P0C7T5	689 aa	Known RBP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	XRCC6	P12956	609 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	BRAF	P15056	766 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	PPIF	P30405	207 aa	Known RBP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	CTBP1	Q13363	440 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	VPS53	Q5VIR6	699 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	KLHDC7A	Q5VTJ3	777 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	ICE2	Q659A1	982 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	SUMO4	Q6EEV6	95 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	ANKRD16	Q6P6B7	361 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	ZNF788	Q6ZQV5	615 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	NOL8	Q76FK4	1167 aa	Known RBP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	CHST15	Q7LFX5	561 aa	Predicted RBP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	ZNF551	Q7Z340	670 aa	Predicted RBP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	DTX2	Q86UW9	622 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	SESTD1	Q86VW0	696 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	ZNF280B	Q86YH2	543 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	SLC15A4	Q8N697	577 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	HASPIN	Q8TF76	798 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	LRTOMT	Q8WZ04	291 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	TBC1D5	Q92609	795 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	FAM136A	Q96C01	138 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	SLC46A1	Q96NT5	459 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	TPSD1	Q9BZJ3	242 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	AMBRA1	Q9C0C7	1298 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	FAM204A	Q9H8W3	233 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	CNNM1	Q9NRU3	951 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	MRPS17	Q9Y2R5	130 aa	Known RBP	4.22	□□□□□ -1.73
RDX-215	ENST00000533961	PLEKHM1	Q9Y4G2	1056 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	KAT6A	Q92794	2004 aa		4.22	□□□□□ -1.73
RDX-215	ENST00000533961	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ADM5	C9JUS6	153 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	BTN3A1	O00481	513 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ZBED1	O96006	694 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	RHO	P08100	348 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	SLC5A1	P13866	664 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ZKSCAN1	P17029	563 aa	Predicted RBP	4.21	□□□□□ -1.74
RDX-215	ENST00000533961	CD6	P30203	668 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	VIPR2	P41587	438 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	PIK3CB	P42338	1070 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ITGA8	P53708	1063 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	LOXL3	P58215	753 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	MTHFD1L	Q6UB35	978 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ZDHHC24	Q6UX98	284 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
RDX-215	ENST00000533961	DNAJC5G	Q8N7S2	189 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	TFAP2B	Q92481	460 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	FKBP10	Q96AY3	582 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	HAPLN3	Q96S86	360 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	TBCB	Q99426	244 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	TRIM54	Q9BYV2	358 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	PRDM11	Q9NQV5	511 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	SERTAD4	Q9NUC0	356 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	FNIP2	Q9P278	1114 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	ADGRA2	Q96PE1	1338 aa		4.21	□□□□□ -1.74
RDX-215	ENST00000533961	MYO1F	O00160	1098 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	MGST3	O14880	152 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	PHGDH	O43175	533 aa	Known RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	PRKCG	P05129	697 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	PIM1	P11309	404 aa	Predicted RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	ZFX	P17010	805 aa	Predicted RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	ITPKB	P27987	946 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	PTGER1	P34995	402 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	GCLC	P48506	637 aa	Predicted RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	ALDH9A1	P49189	494 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms