RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
RDX-215ENST00000533961 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
RDX-215ENST00000533961 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
RDX-215ENST00000533961 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
RDX-215ENST00000533961 FOXD1Q16676 465 aa20.77■□□□□ 0.92
RDX-215ENST00000533961 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
RDX-215ENST00000533961 MSH5O43196 834 aa19.66■□□□□ 0.74
RDX-215ENST00000533961 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
RDX-215ENST00000533961 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
RDX-215ENST00000533961 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
RDX-215ENST00000533961 ADRA2BP18089 450 aa19.02■□□□□ 0.64
RDX-215ENST00000533961 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
RDX-215ENST00000533961 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
RDX-215ENST00000533961 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
RDX-215ENST00000533961 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
RDX-215ENST00000533961 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
RDX-215ENST00000533961 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
RDX-215ENST00000533961 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
RDX-215ENST00000533961 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
RDX-215ENST00000533961 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
RDX-215ENST00000533961 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
RDX-215ENST00000533961 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
RDX-215ENST00000533961 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
RDX-215ENST00000533961 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
RDX-215ENST00000533961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.161e-6■■■□□ 18.4
RDX-215ENST00000533961 NPM3O75607 178 aaKnown RBP15.8■□□□□ 0.12
RDX-215ENST00000533961 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
RDX-215ENST00000533961 CAPN15O75808 1086 aa15.52■□□□□ 0.08
RDX-215ENST00000533961 DSG3P32926 999 aa15.49■□□□□ 0.07
RDX-215ENST00000533961 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
RDX-215ENST00000533961 POTEHQ6S545 545 aa15.45■□□□□ 0.06
RDX-215ENST00000533961 APLP2Q06481 763 aa15.24■□□□□ 0.03
RDX-215ENST00000533961 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
RDX-215ENST00000533961 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
RDX-215ENST00000533961 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
RDX-215ENST00000533961 KCNA4P22459 653 aa15.14■□□□□ 0.01
RDX-215ENST00000533961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
RDX-215ENST00000533961 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
RDX-215ENST00000533961 ABCB7O75027 752 aa15.08■□□□□ 0
RDX-215ENST00000533961 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
RDX-215ENST00000533961 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
RDX-215ENST00000533961 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
RDX-215ENST00000533961 POLA2Q14181 598 aa14.67□□□□□ -0.06
RDX-215ENST00000533961 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
RDX-215ENST00000533961 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
RDX-215ENST00000533961 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
RDX-215ENST00000533961 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
RDX-215ENST00000533961 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
RDX-215ENST00000533961 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
RDX-215ENST00000533961 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
RDX-215ENST00000533961 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
RDX-215ENST00000533961 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
RDX-215ENST00000533961 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
RDX-215ENST00000533961 HAX1O00165 279 aa14.09□□□□□ -0.15
RDX-215ENST00000533961 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
RDX-215ENST00000533961 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
RDX-215ENST00000533961 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
RDX-215ENST00000533961 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
RDX-215ENST00000533961 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
RDX-215ENST00000533961 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
RDX-215ENST00000533961 FBLN2P98095 1184 aa13.87□□□□□ -0.19
RDX-215ENST00000533961 ZBTB22O15209 634 aa13.86□□□□□ -0.19
RDX-215ENST00000533961 EVX2Q03828 476 aa13.8□□□□□ -0.2
RDX-215ENST00000533961 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
RDX-215ENST00000533961 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
RDX-215ENST00000533961 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
RDX-215ENST00000533961 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
RDX-215ENST00000533961 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
RDX-215ENST00000533961 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
RDX-215ENST00000533961 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
RDX-215ENST00000533961 GABBR2O75899 941 aa13.52□□□□□ -0.25
RDX-215ENST00000533961 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
RDX-215ENST00000533961 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
RDX-215ENST00000533961 LHX8Q68G74 356 aa13.42□□□□□ -0.26
RDX-215ENST00000533961 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
RDX-215ENST00000533961 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
RDX-215ENST00000533961 CLCN6P51797 869 aa13.27□□□□□ -0.29
RDX-215ENST00000533961 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
RDX-215ENST00000533961 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
RDX-215ENST00000533961 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
RDX-215ENST00000533961 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
RDX-215ENST00000533961 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
RDX-215ENST00000533961 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
RDX-215ENST00000533961 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
RDX-215ENST00000533961 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
RDX-215ENST00000533961 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
RDX-215ENST00000533961 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
RDX-215ENST00000533961 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
RDX-215ENST00000533961 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
RDX-215ENST00000533961 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
RDX-215ENST00000533961 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
RDX-215ENST00000533961 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
RDX-215ENST00000533961 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
RDX-215ENST00000533961 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
RDX-215ENST00000533961 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
RDX-215ENST00000533961 POTEMA6NI47 508 aa12.65□□□□□ -0.38
RDX-215ENST00000533961 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
RDX-215ENST00000533961 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
RDX-215ENST00000533961 C7P10643 843 aa12.61□□□□□ -0.39
RDX-215ENST00000533961 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms