RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RNF43Q68DV7 783 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 SFTPA1Q8IWL2 248 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 PDCL2Q8N4E4 241 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ADAM32Q8TC27 787 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 MYRFLQ96LU7 910 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ZSCAN31Q96LW9 406 aaPredicted RBP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 GCNAQ96QF7 691 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 EDEM2Q9BV94 578 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 STRA6Q9BX79 667 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 TPSD1Q9BZJ3 242 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 ECT2Q9H8V3 914 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 KIF9Q9HAQ2 790 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 GCNT4Q9P109 453 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 EBF1Q9UH73 591 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 KCNG1Q9UIX4 513 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 DSEQ9UL01 958 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 MAGED2Q9UNF1 606 aaPredicted RBP9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 INVSQ9Y283 1065 aa9.9□□□□□ -0.82
CHMP4A-205ENST00000531158 NAV2Q8IVL1 2488 aa9.9□□□□□ -0.83
CHMP4A-205ENST00000531158 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.83
CHMP4A-205ENST00000531158 PTPRBP23467 1997 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 C2orf78A6NCI8 922 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 K7EQS6 105 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 PRPF40AO75400 957 aaKnown RBP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 FAM13AO94988 1023 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 MBD3O95983 291 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 DRD1P21728 446 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 PAX3P23760 479 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 DDX6P26196 483 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 OPRD1P41143 372 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 FAM160A1Q05DH4 1040 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 PDGFRLQ15198 375 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 PMS2CLQ68D20 193 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 ADALQ6DHV7 355 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 USP49Q70CQ1 688 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 RASSF3Q86WH2 238 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 C1orf127Q8N9H9 656 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 OSCP1Q8WVF1 389 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 RAD54LQ92698 747 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 TRMT2BQ96GJ1 504 aaKnown RBP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 CDK5RAP3Q96JB5 506 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 FGFBP2Q9BYJ0 223 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 LINC00597Q9H2U6 94 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 ST6GALNAC4Q9H4F1 302 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 LMBRD1Q9NUN5 540 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 AGO2Q9UKV8 859 aaKnown RBP9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
CHMP4A-205ENST00000531158 PTPRJQ12913 1337 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 APBB3O95704 486 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 CAVIN2O95810 425 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 ITGB3P05106 788 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 POLR2BP30876 1174 aaKnown RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 CASP5P51878 434 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 USP46P62068 366 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 PTPAQ15257 358 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 TAF12Q16514 161 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 SH3PXD2AQ5TCZ1 1133 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 MCTP1Q6DN14 999 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 METTL23Q86XA0 190 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 SFR1Q86XK3 245 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 THEM5Q8N1Q8 247 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 FRMD1Q8N878 549 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 MDGA1Q8NFP4 955 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 USP33Q8TEY7 942 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 MRPS31Q92665 395 aaKnown RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 CD101Q93033 1021 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 AK8Q96MA6 479 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 BBC3Q96PG8 261 aaPredicted RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 ZHX3Q9H4I2 956 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 DUS2Q9NX74 493 aaKnown RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 DDX43Q9NXZ2 648 aaKnown RBP9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 ZMYM5Q9UJ78 669 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 GTF3C4Q9UKN8 822 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 NME7Q9Y5B8 376 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 ADAMTS20P59510 1910 aa9.88□□□□□ -0.83
CHMP4A-205ENST00000531158 TP53BP1Q12888 1972 aaPredicted RBP9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 ATP2C2O75185 946 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 CKMP06732 381 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 CSH1P0DML2 217 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 CSH2P0DML3 217 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 PDIA4P13667 645 aaKnown RBP9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 SCP2P22307 547 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 DGKEP52429 567 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 COL28A1Q2UY09 1125 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 SV2CQ496J9 727 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 CFAP221Q4G0U5 840 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 FBXO43Q4G163 708 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 C2orf27AQ580R0 203 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 ANO7Q6IWH7 933 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 CC2D1AQ6P1N0 951 aaPredicted RBP9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 ZNF720Q7Z2F6 126 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 LIMS2Q7Z4I7 341 aa9.87□□□□□ -0.83
CHMP4A-205ENST00000531158 DCP1BQ8IZD4 617 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms