RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 WDR5BQ86VZ2 330 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 LONP2Q86WA8 852 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 SFR1Q86XK3 245 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 YAF2Q8IY57 180 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 CMTM8Q8IZV2 173 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 TOP6BLQ8N6T0 577 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 C1orf127Q8N9H9 656 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 CACTINQ8WUQ7 758 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 POMGNT1Q8WZA1 660 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 FUBP3Q96I24 572 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 LOXL4Q96JB6 756 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 ZNF560Q96MR9 790 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 PYM1Q9BRP8 204 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 RTKNQ9BST9 563 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 ZHX3Q9H4I2 956 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 ZSCAN16Q9H4T2 348 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 TMEM206Q9H813 350 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 MRPL44Q9H9J2 332 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 KIF9Q9HAQ2 790 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 TDP1Q9NUW8 608 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 TMLHEQ9NVH6 421 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 THG1LQ9NWX6 298 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 NCDNQ9UBB6 729 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 ITGA11Q9UKX5 1188 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 NDRG2Q9UN36 371 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 SMG5Q9UPR3 1016 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 PCDHB5Q9Y5E4 795 aa6.08□□□□□ -1.44
CTNNA1-219ENST00000520158 GREB1Q4ZG55 1949 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 A0A087X0B3 334 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 MED19A0JLT2 244 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SLC38A8A6NNN8 435 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 TULP2O00295 520 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 PPP1R12AO14974 1030 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 EXTL3O43909 919 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 ATG13O75143 517 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SOAT2O75908 522 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 AKAP3O75969 853 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 TXLNAP40222 546 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 MAGEA11P43364 429 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 LHX1P48742 406 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 KPNA1P52294 538 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 ATXN1P54253 815 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 WNT7BP56706 349 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SNRPFP62306 86 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 RPL10AP62906 217 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 RBP5P82980 135 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 AMPD2Q01433 879 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 RUNX3Q13761 415 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SURF1Q15526 300 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 CSRP2Q16527 193 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SOWAHAQ2M3V2 549 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 C11orf91Q3C1V1 193 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 MGAT5BQ3V5L5 792 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 FBXO43Q4G163 708 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 TMEM196Q5HYL7 178 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 PDCL2Q8N4E4 241 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 CAMKK1Q8N5S9 505 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 ACRBPQ8NEB7 543 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 RASSF8Q8NHQ8 419 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 ZNF507Q8TCN5 953 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 TMEM174Q8WUU8 243 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 USP13Q92995 863 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 CHFRQ96EP1 664 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SPATA17Q96L03 361 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 CLIC6Q96NY7 704 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SEPT5Q99719 369 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 LPIN3Q9BQK8 851 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 FAM213AQ9BRX8 229 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 LRRC27Q9C0I9 530 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 IKZF4Q9H2S9 585 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 CUEDC2Q9H467 287 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 KIAA1586Q9HCI6 787 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 PARD6AQ9NPB6 346 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 HPS4Q9NQG7 708 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 GKN1Q9NS71 199 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 KBTBD4Q9NVX7 518 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 GTSE1Q9NYZ3 720 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 KLHL42Q9P2K6 505 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 CGNQ9P2M7 1197 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 UXTQ9UBK9 157 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 SIX4Q9UIU6 781 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 AGAP1Q9UPQ3 857 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 MTMR6Q9Y217 621 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 ANAPC1Q9H1A4 1944 aa6.07□□□□□ -1.44
CTNNA1-219ENST00000520158 ZNF638Q14966 1978 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 CCDC189A1A4V9 331 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 CFAP69A5D8W1 941 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 OTOL1A6NHN0 477 aaPredicted RBP6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 SLC30A4O14863 429 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 EIF3DO15371 548 aaKnown RBP eCLIP6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 HUS1O60921 280 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 PPP6R2O75170 966 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 STAU1O95793 577 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 ITGB3P05106 788 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 NAT1P18440 290 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 DRD1P21728 446 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 CYP2F1P24903 491 aa6.06□□□□□ -1.44
CTNNA1-219ENST00000520158 PCSK1P29120 753 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms