RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FSTL1Q12841 308 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 SEPT7Q16181 437 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 KLHL38Q2WGJ6 581 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 CAPRIN2Q6IMN6 1127 aaKnown RBP17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 BBS12Q6ZW61 710 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 RSAD2Q8WXG1 361 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 SLC7A3Q8WY07 619 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 ANKRD27Q96NW4 1050 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 NIF3L1Q9GZT8 377 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 GINM1Q9NU53 330 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 HEY2Q9UBP5 337 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 KCNG1Q9UIX4 513 aa17.36■□□□□ 0.37
PCDHGA11-202ENST00000518882 NDC80O14777 642 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 LIN7AO14910 233 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 STAM2O75886 525 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 UPP2O95045 317 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 ATG7O95352 703 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 EIF4BP23588 611 aaKnown RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 MARK3P27448 753 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 HIRAP54198 1017 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 CXCL9Q07325 125 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 TMEM132BQ14DG7 1078 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 TAF5Q15542 800 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 SYCP2LQ5T4T6 812 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 DSTYKQ6XUX3 929 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 WDR49Q8IV35 697 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 PALM2Q8IXS6 379 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 EMC1Q8N766 993 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 FAM71DQ8N9W8 422 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 CDHR1Q96JP9 859 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 SERAC1Q96JX3 654 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 PHACTR1Q9C0D0 580 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 ZNF518BQ9C0D4 1074 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 VPS11Q9H270 941 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 KCNK13Q9HB14 408 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 CORO1CQ9ULV4 474 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 PCDHGC3Q9UN70 934 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 CHMP2BQ9UQN3 213 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 ANK1P16157 1881 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 CFAP69A5D8W1 941 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 C2orf71A6NGG8 1288 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 LUC7L3O95232 432 aaKnown RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 TAZQ16635 292 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 KHDC1Q4VXA5 237 aaKnown RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 CDCA2Q69YH5 1023 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 ANO7Q6IWH7 933 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 C4orf50Q6ZRC1 276 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 PTCD3Q96EY7 689 aaKnown RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 OSBPL1AQ9BXW6 950 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 FBXO6Q9NRD1 293 aaPredicted RBP17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 EFR3BQ9Y2G0 817 aa17.35■□□□□ 0.37
PCDHGA11-202ENST00000518882 DOCK1Q14185 1865 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 A6NHS1 94 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 KRT3P12035 628 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 HSPA1LP34931 641 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 ASPAP45381 313 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 CCNHP51946 323 aaPredicted RBP17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 TSSK1BQ9BXA7 367 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 TMEM134Q9H6X4 195 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 PCSK1NQ9UHG2 260 aa17.34■□□□□ 0.37
PCDHGA11-202ENST00000518882 SIGLEC16A6NMB1 481 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 ADCY3O60266 1144 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 LPXNO60711 386 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 SERPINB3P29508 390 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 ETV4P43268 484 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 BASP1P80723 227 aaKnown RBP17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 GNPTABQ3T906 1256 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 PDIK1LQ8N165 341 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 TTLL6Q8N841 843 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 FAM111AQ96PZ2 611 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 TRIM55Q9BYV6 548 aa17.33■□□□□ 0.37
PCDHGA11-202ENST00000518882 HAUS5O94927 633 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 KRT7P08729 469 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 LINGO3P0C6S8 592 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 DHRS4L1P0CG22 281 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 ATP6V1C1P21283 382 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 ELK3P41970 407 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 NEK3P51956 506 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 BACE1P56817 501 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 PTK7Q13308 1070 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 SH2D5Q6ZV89 423 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 TMEM130Q8N3G9 435 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 TTC13Q8NBP0 860 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 SKA1Q96BD8 255 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 ALKBH8Q96BT7 664 aaKnown RBP17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 TCHPQ9BT92 498 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 TMEM120AQ9BXJ8 343 aa17.33■□□□□ 0.36
PCDHGA11-202ENST00000518882 TCRBV9S1A1TA0A576 114 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 MSCO60682 206 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 MT-ND3P03897 115 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 RAP1GAPP47736 663 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 ARFIP2P53365 341 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 EIF3EP60228 445 aaKnown RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 ORC1Q13415 861 aa17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 PRKD1Q15139 912 aaPredicted RBP17.32■□□□□ 0.36
PCDHGA11-202ENST00000518882 SGSM1Q2NKQ1 1148 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms