RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, human

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP2-215	ENST00000512098	ATF7IP2	Q5U623	682 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	BROX	Q5VW32	411 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	CHD1L	Q86WJ1	897 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	SMC5	Q8IY18	1101 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	ZNF248	Q8NDW4	579 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	MCPH1	Q8NEM0	835 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	YTHDC1	Q96MU7	727 aa	Known RBP	13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	PNKP	Q96T60	521 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	LGMN	Q99538	433 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	CYP8B1	Q9UNU6	501 aa		13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.76	□□□□□ -0.21
SSBP2-215	ENST00000512098	ICE1	Q9Y2F5	2266 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	BRINP1	O60477	761 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	NDUFS2	O75306	463 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	USP17L7	P0C7H9	530 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	CHML	P26374	656 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	MESP2	Q0VG99	397 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	2e-6	■■□□□ 12.3
SSBP2-215	ENST00000512098	C4orf17	Q53FE4	359 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	CCDC157	Q569K6	752 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	OVOS1	Q6IE37	1185 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	ARMCX5	Q6P1M9	558 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	TRMT11	Q7Z4G4	463 aa	Known RBP	13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	GIPC2	Q8TF65	315 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	HAS1	Q92839	578 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	CCDC43	Q96MW1	224 aa	Known RBP	13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	ACAP3	Q96P50	834 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	HSD17B14	Q9BPX1	270 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	FAM117A	Q9C073	453 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	CPNE5	Q9HCH3	593 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	SH3GLB2	Q9NR46	395 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	GMIP	Q9P107	970 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	TNFSF13B	Q9Y275	285 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098	CACNA1D	Q01668	2161 aa		13.75	□□□□□ -0.21
SSBP2-215	ENST00000512098		M0R2N6	131 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	USO1	O60763	962 aa	Known RBP	13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	C1S	P09871	688 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	XRCC6	P12956	609 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	HSPA4	P34932	840 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	GRIA2	P42262	883 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	NAMPT	P43490	491 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	RIPPLY3	P57055	190 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	DMP1	Q13316	513 aa	Predicted RBP	13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	NCAPH2	Q6IBW4	605 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	ZCCHC9	Q8N567	271 aa	Known RBP	13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	KIAA1958	Q8N8K9	716 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	C2orf15	Q8WU43	125 aa	Known RBP	13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	NACC1	Q96RE7	527 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	CD248	Q9HCU0	757 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	VPS54	Q9P1Q0	977 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	CENPE	Q02224	2701 aa		13.74	□□□□□ -0.21
SSBP2-215	ENST00000512098	STK36	Q9NRP7	1315 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	SLC27A2	O14975	620 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	BCAT2	O15382	392 aa	Predicted RBP	13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	PCDHGA12	O60330	932 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	TADA3	O75528	432 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	AFP	P02771	609 aa	Known RBP	13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	CR2	P20023	1033 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	LRPAP1	P30533	357 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	SLC6A11	P48066	632 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	EFNA5	P52803	228 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	EXOSC10	Q01780	885 aa	Known RBP	13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	SMARCB1	Q12824	385 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	PADI6	Q6TGC4	694 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	ATG14	Q6ZNE5	492 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	POTED	Q86YR6	584 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	CACTIN-AS1	Q8N1I8	211 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	SH3RF2	Q8TEC5	729 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	BSND	Q8WZ55	320 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	SLC22A12	Q96S37	553 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	CDT1	Q9H211	546 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	PTPRH	Q9HD43	1115 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	ZDHHC4	Q9NPG8	344 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	PCDHA4	Q9UN74	947 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	POLQ	O75417	2590 aa		13.73	□□□□□ -0.21
SSBP2-215	ENST00000512098	TRAV19	A0A0A6YYK7	116 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	KLF18	A0A0U1RQI7	1052 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098		A0A1W2PQF6	199 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	ZBTB24	O43167	697 aa	Predicted RBP	13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	CYP17A1	P05093	508 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	CKM	P06732	381 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	HAPLN1	P10915	354 aa	Predicted RBP	13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	HOXB2	P14652	356 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	LIG1	P18858	919 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	NDUFV2	P19404	249 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	NLRP5	P59047	1200 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	OSTN	P61366	133 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	NUCB1	Q02818	461 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	VAC14	Q08AM6	782 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	SLC39A12	Q504Y0	691 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	B4GALNT3	Q6L9W6	998 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	MAEA	Q7L5Y9	396 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	ADGRG2	Q8IZP9	1017 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	CADM4	Q8NFZ8	388 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	OR10T2	Q8NGX3	314 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	DEPTOR	Q8TB45	409 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	SPPL2B	Q8TCT7	592 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	CYP2S1	Q96SQ9	504 aa		13.72	□□□□□ -0.21
SSBP2-215	ENST00000512098	RNF26	Q9BY78	433 aa	Predicted RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms