RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 CT47A1Q5JQC4 288 aaPredicted RBP3.69□□□□□ -1.82
SUB1-208ENST00000511175 GORABQ5T7V8 394 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 ICE2Q659A1 982 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 PGM2L1Q6PCE3 622 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 KIRREL2Q6UWL6 708 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 PARS2Q7L3T8 475 aaKnown RBP3.69□□□□□ -1.82
SUB1-208ENST00000511175 USP37Q86T82 979 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 SMC5Q8IY18 1101 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 CCDC146Q8IYE0 955 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 GALNT4Q8N4A0 578 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 GLG1Q92896 1179 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 R3HDM4Q96D70 268 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 DAZAP1Q96EP5 407 aaKnown RBP3.69□□□□□ -1.82
SUB1-208ENST00000511175 PPP1R10Q96QC0 940 aaKnown RBP3.69□□□□□ -1.82
SUB1-208ENST00000511175 NELL2Q99435 816 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 FOXP1Q9H334 677 aaPredicted RBP3.69□□□□□ -1.82
SUB1-208ENST00000511175 SH2B3Q9UQQ2 575 aa3.69□□□□□ -1.82
SUB1-208ENST00000511175 H7C1Q1 480 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 GTPBP1O00178 669 aaKnown RBP3.68□□□□□ -1.82
SUB1-208ENST00000511175 DCLK1O15075 740 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 EXOC3O60645 756 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 ALDH1L1O75891 902 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 ABLIM3O94929 683 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 TMEM191BP0C7N4 346 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 EPHB1P54762 984 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 DSC2Q02487 901 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 ERV3-1Q14264 604 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 KIF22Q14807 665 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 PPP4R3AQ6IN85 833 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 Q6ZWC4 215 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 CCAR1Q8IX12 1150 aaKnown RBP3.68□□□□□ -1.82
SUB1-208ENST00000511175 MORC4Q8TE76 937 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 ATG4AQ8WYN0 398 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 TSR2Q969E8 191 aaKnown RBP3.68□□□□□ -1.82
SUB1-208ENST00000511175 COA7Q96BR5 231 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 LENG8Q96PV6 779 aaPredicted RBP3.68□□□□□ -1.82
SUB1-208ENST00000511175 FAM118BQ9BPY3 351 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 THAP7Q9BT49 309 aaPredicted RBP3.68□□□□□ -1.82
SUB1-208ENST00000511175 SERPINB13Q9UIV8 391 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 PROCRQ9UNN8 238 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 WASHC2CQ9Y4E1 1318 aa3.68□□□□□ -1.82
SUB1-208ENST00000511175 TCF20Q9UGU0 1960 aaKnown RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 A1L4Q6 167 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 M0QYG6 137 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 TSPAN6O43657 245 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 PCDHGA12O60330 932 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 EIF3JO75822 258 aaKnown RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 SMARCA1P28370 1054 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 CNGA1P29973 690 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 PRDX5P30044 214 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 IARSP41252 1262 aaKnown RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 KCNJ5P48544 419 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 PIK3CGP48736 1102 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 RENBPP51606 427 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 ALDH5A1P51649 535 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 RHBDL3P58872 404 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 GPSM2P81274 684 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 KIF23Q02241 960 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 ZNF268Q14587 947 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 TTF1Q15361 905 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 TWIST1Q15672 202 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 INAVAQ3KP66 663 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 CERKLQ49MI3 558 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 C10orf25Q5T742 122 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 MEX3CQ5U5Q3 659 aaKnown RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 CCSAPQ6IQ19 270 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 C9orf47Q6ZRZ4 202 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 FAM90A1Q86YD7 464 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 KRT78Q8N1N4 520 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 TERB1Q8NA31 727 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 ZBTB8BQ8NAP8 495 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 FAM46DQ8NEK8 389 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 RP9Q8TA86 221 aaKnown RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 XAGE5Q8WWM1 108 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 SLC39A13Q96H72 371 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 SLC46A1Q96NT5 459 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 EFHD1Q9BUP0 239 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 TTYH3Q9C0H2 523 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 MAN1C1Q9NR34 630 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 TCEAL9Q9UHQ7 104 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 MCM8Q9UJA3 840 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 CCNL1Q9UK58 526 aaPredicted RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 PCDHGA9Q9Y5G4 932 aaKnown RBP3.67□□□□□ -1.82
SUB1-208ENST00000511175 PCDHGA8Q9Y5G5 932 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 PCDHGA7Q9Y5G6 932 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 PCDHGA6Q9Y5G7 932 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 PCDHGA3Q9Y5H0 932 aa3.67□□□□□ -1.82
SUB1-208ENST00000511175 TCRBV5S1A1TA0A578 114 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 KIF3BO15066 747 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 USP1O94782 785 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 OAZ2O95190 189 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 CYP19A1P11511 503 aaPredicted RBP3.66□□□□□ -1.82
SUB1-208ENST00000511175 GNALP38405 381 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 MCL1Q07820 350 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 L1TD1Q5T7N2 865 aaKnown RBP3.66□□□□□ -1.82
SUB1-208ENST00000511175 ARHGAP40Q5TG30 622 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 RNF219Q5W0B1 726 aaPredicted RBP3.66□□□□□ -1.82
SUB1-208ENST00000511175 SFRP4Q6FHJ7 346 aaPredicted RBP3.66□□□□□ -1.82
SUB1-208ENST00000511175 SERPINA13PQ6UXR4 307 aa3.66□□□□□ -1.82
SUB1-208ENST00000511175 USP43Q70EL4 1123 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms