RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ZFP69Q49AA0 526 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ANKRD26P1Q6NSI1 321 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 BBS4Q96RK4 519 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 ERAP1Q9NZ08 941 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 SLC4A4Q9Y6R1 1079 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 FAM86C2PA6NEL3 165 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC10BA6NIK2 292 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TFECO14948 347 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MAGEA10P43363 369 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CD97P48960 835 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CDK16Q00536 496 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 WASHC5Q12768 1159 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 TRAF3Q13114 568 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MSLNQ13421 630 aaPredicted RBP6.31□□□□□ -1.4
LINC02397-201ENST00000504409 CDHR1Q96JP9 859 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MNTQ99583 582 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 HPS4Q9NQG7 708 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 MCUBQ9NWR8 336 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 PHTF1Q9UMS5 762 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 SLC30A1Q9Y6M5 507 aa6.31□□□□□ -1.4
LINC02397-201ENST00000504409 SNX3O60493 162 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SUPT3HO75486 399 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 REM1O75628 298 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SOX30O94993 753 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 HNRNPH3P31942 346 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF181Q2M3W8 571 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SLC9C2Q5TAH2 1124 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 LINC00523Q86TU6 105 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CCDC117Q8IWD4 279 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CREB3L1Q96BA8 519 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SEC31BQ9NQW1 1179 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PCYOX1Q9UHG3 505 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ITGA11Q9UKX5 1188 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 NUP50Q9UKX7 468 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ZBTB1Q9Y2K1 713 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 MST1RQ04912 1400 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PI4KAP2A4QPH2 592 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PHGDHO43175 533 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 TAF5LO75529 589 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PSMA2P25787 234 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 IL18R1Q13478 541 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 NR1D2Q14995 579 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PDK4Q16654 411 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PPIL6Q8IXY8 311 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PI4KAP1Q8N8J0 262 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 FNDC8Q8TC99 324 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 JARID2Q92833 1246 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 STUB1Q9UNE7 303 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PA2G4Q9UQ80 394 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 COL15A1P39059 1388 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CCDC189A1A4V9 331 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CYP19A1P11511 503 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 FDFT1P37268 417 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ITGADQ13349 1161 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CNPY1Q3B7I2 92 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 TRIM67Q6ZTA4 783 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 POC5Q8NA72 575 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CDRT15Q96T59 188 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CHID1Q9BWS9 393 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 VPS4AQ9UN37 437 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 DENND4BO75064 1496 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ASNSP08243 561 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CDH6P55285 790 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC8DQ7L1W4 858 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CATSPER3Q86XQ3 398 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 NUDT16Q96DE0 195 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 TCF7L2Q9NQB0 619 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SH3BP1Q9Y3L3 701 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 KIF13BQ9NQT8 1826 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PRMT5O14744 637 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 GJB6O95452 261 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 YES1P07947 543 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PSMC6P62333 389 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ARID5AQ03989 594 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PDIA2Q13087 525 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 C16orf72Q14CZ0 275 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 DGKKQ5KSL6 1271 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 THEMISQ8N1K5 641 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 MCOLN3Q8TDD5 553 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PROX1Q92786 737 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ARHGEF26Q96DR7 871 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 MTMR12Q9C0I1 747 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SLA2Q9H6Q3 261 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ARHGEF35A5YM69 484 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 VAPBO95292 243 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ERCC2P18074 760 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 EFR3AQ14156 821 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 AARS2Q5JTZ9 985 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PRPF39Q86UA1 669 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CKAP2Q8WWK9 683 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PPP3R2Q96LZ3 170 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 KCTD15Q96SI1 283 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 POU5F1Q01860 360 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 MOGQ16653 247 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms