RNA–Protein interactions for RNA: ENST00000503369.1

AFF1-203, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-203ENST00000503369 PCOLCE2Q9UKZ9 415 aa6.22□□□□□ -1.41
AFF1-203ENST00000503369 PCDHA6Q9UN73 950 aa6.22□□□□□ -1.41
AFF1-203ENST00000503369 PCDHB2Q9Y5E7 798 aa6.22□□□□□ -1.41
AFF1-203ENST00000503369 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
AFF1-203ENST00000503369 PCDHA10Q9Y5I2 948 aa6.22□□□□□ -1.41
AFF1-203ENST00000503369 SMG1Q96Q15 3661 aaKnown RBP6.22□□□□□ -1.41
AFF1-203ENST00000503369 A0A0D9SFI3 127 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 LNP1A1A4G5 178 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 CAPN9O14815 690 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 CYTH3O43739 400 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 DDAH1O94760 285 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 DDHD2O94830 711 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 CAVIN2O95810 425 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 EFEMP2O95967 443 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 LRG1P02750 347 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 NTRK1P04629 796 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 SPATA31D3P0C874 917 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 AXLP30530 894 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 SFNP31947 248 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 DSC1Q08554 894 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 SPIRE1Q08AE8 756 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 GRIK3Q13003 919 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 SEC23AQ15436 765 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 SWSAP1Q6NVH7 229 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 SPATA31D4Q6ZUB0 917 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 MRPL10Q7Z7H8 261 aaKnown RBP6.21□□□□□ -1.42
AFF1-203ENST00000503369 YAF2Q8IY57 180 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 COLGALT2Q8IYK4 626 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 ELMOD1Q8N336 334 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 CCDC26Q8TAB7 109 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 FEZF2Q8TBJ5 459 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 LPPQ93052 612 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 LIN7BQ9HAP6 207 aa6.21□□□□□ -1.42
AFF1-203ENST00000503369 PRG3Q9Y2Y8 225 aaPredicted RBP6.21□□□□□ -1.42
AFF1-203ENST00000503369 DOPEY2Q9Y3R5 2298 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 BCLAF3A2AJT9 711 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 IPO5O00410 1097 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 MEIS1O00470 390 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 CCL16O15467 120 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 RNGTTO60942 597 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 CALM1P0DP23 149 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 CALM2P0DP24 149 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 CALM3P0DP25 149 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 ITGA4P13612 1032 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 PTPN2P17706 415 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 NCLP19338 710 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 GDI1P31150 447 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 KPNA1P52294 538 aaPredicted RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 AMPD2Q01433 879 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 CREB5Q02930 508 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 SRSF5Q13243 272 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 ITGB3BPQ13352 177 aaPredicted RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 PSMD5Q16401 504 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 TMEM164Q5U3C3 297 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 LMBRD2Q68DH5 695 aaPredicted RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 SRGAP1Q7Z6B7 1085 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 RABEPKQ7Z6M1 372 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 ZNF605Q86T29 641 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 KBTBD6Q86V97 674 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 LRRC71Q8N4P6 559 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 ITFG1Q8TB96 612 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 SLC7A14Q8TBB6 771 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 SMARCD2Q92925 531 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 ISL2Q96A47 359 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 KCNC2Q96PR1 638 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 TTPALQ9BTX7 342 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 NUSAP1Q9BXS6 441 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 EPB41L4BQ9H329 900 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 CARS2Q9HA77 564 aaKnown RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 DKK4Q9UBT3 224 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 EVLQ9UI08 416 aaPredicted RBP6.2□□□□□ -1.42
AFF1-203ENST00000503369 SLC8A2Q9UPR5 921 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 SAMM50Q9Y512 469 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 GTF3C3Q9Y5Q9 886 aa6.2□□□□□ -1.42
AFF1-203ENST00000503369 DDX39AO00148 427 aaKnown RBP6.19□□□□□ -1.42
AFF1-203ENST00000503369 IFIT3O14879 490 aaKnown RBP6.19□□□□□ -1.42
AFF1-203ENST00000503369 GIPC1O14908 333 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 CHADO15335 359 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 TADA2AO75478 443 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 ERLIN2O94905 339 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 CCNE2O96020 404 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 POMCP01189 267 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 RHOP08100 348 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 SLFN14P0C7P3 912 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 CCNE1P24864 410 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 MPSTP25325 297 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 HOXD12P35452 270 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 SREBF1P36956 1147 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 JAK3P52333 1124 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 NMIQ13287 307 aaPredicted RBP6.19□□□□□ -1.42
AFF1-203ENST00000503369 PLK5Q496M5 336 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 CYP4A22Q5TCH4 519 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 NOTUMQ6P988 496 aa6.19□□□□□ -1.42
AFF1-203ENST00000503369 PDZD4Q76G19 769 aaPredicted RBP6.19□□□□□ -1.42
AFF1-203ENST00000503369 ZNF589Q86UQ0 364 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms