RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 CNGA2Q16280 664 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 SPECC1LQ69YQ0 1117 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 DENND1BQ6P3S1 775 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 CLEC20AQ6ZU45 233 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 SCN4BQ8IWT1 228 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 CMASQ8NFW8 434 aaPredicted RBP12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 MRFAP1L1Q96HT8 127 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 EDEM3Q9BZQ6 932 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 SFXN1Q9H9B4 322 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 TSPAN16Q9UKR8 245 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 KIAA1257Q9ULG3 409 aa12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
RHBDF1-211ENST00000493647 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 HHLA1C9JL84 531 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 TULP2O00295 520 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 THAP12O43422 761 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 POU2F2P09086 479 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 FAM200BP0CF97 657 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 CYP11B1P15538 503 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 CHRNB2P17787 502 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 KCNA5P22460 613 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 GRIK1P39086 918 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 GOLGA8FQ08AF8 430 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 GOLGA8DPQ0D2H9 430 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 MTMR3Q13615 1198 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 LCLAT1Q6UWP7 414 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 RTL10Q7L3V2 364 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 NOP9Q86U38 636 aaKnown RBP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 UBA3Q8TBC4 463 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 EPS8L1Q8TE68 723 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 SLC20A1Q8WUM9 679 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 CPLX3Q8WVH0 158 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 ZNF606Q8WXB4 792 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 SMARCD1Q96GM5 515 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 C8orf48Q96LL4 319 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 NUP58Q9BVL2 599 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 DUSP16Q9BY84 665 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 DMAP1Q9NPF5 467 aaPredicted RBP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 HCFC1R1Q9NWW0 138 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 DPP7Q9UHL4 492 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 NOCTQ9UK39 431 aaKnown RBP12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 MYO6Q9UM54 1294 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 ATP8B3O60423 1300 aa12.83□□□□□ -0.36
RHBDF1-211ENST00000493647 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 GABBR2O75899 941 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 ADCY5O95622 1261 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 LRG1P02750 347 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 SRGAP2BP0DMP2 458 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 HMGA1P17096 107 aaKnown RBP12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 NPR3P17342 541 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 HOXB8P17481 243 aaPredicted RBP12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 CASP14P31944 242 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 ALDH1A3P47895 512 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 MAP3K7CLP57077 242 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 USP46P62068 366 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 NTHL1P78549 312 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 ARID5AQ03989 594 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 PTK2Q05397 1052 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 PDE4CQ08493 712 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 TAF3Q5VWG9 929 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 GPRIN1Q7Z2K8 1008 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 IRF2BP2Q7Z5L9 587 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 GPR149Q86SP6 731 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 SMRP1Q8NCR6 262 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 SMG7Q92540 1137 aaKnown RBP12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 HLA-CQ95604 372 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 SPATA17Q96L03 361 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 LRRC3Q9BY71 257 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 ADAM7Q9H2U9 754 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 ZNF334Q9HCZ1 680 aaPredicted RBP12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 DNMT3BQ9UBC3 853 aaKnown RBP12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 CYTH4Q9UIA0 394 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 CD207Q9UJ71 328 aa12.82□□□□□ -0.36
RHBDF1-211ENST00000493647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■■□□□ 12.4
RHBDF1-211ENST00000493647 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
RHBDF1-211ENST00000493647 SLC38A8A6NNN8 435 aa12.81□□□□□ -0.36
RHBDF1-211ENST00000493647 M0QYV0 167 aa12.81□□□□□ -0.36
RHBDF1-211ENST00000493647 TNFRSF10BO14763 440 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms