RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 ARID3AQ99856 593 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
TRIM56-204ENST00000487252 TMEM206Q9H813 350 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIM56-204ENST00000487252 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 PCDHGA1Q9Y5H4 931 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 CCDC196A0A1B0GTZ2 297 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
TRIM56-204ENST00000487252 KAT7O95251 611 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 NFATC1O95644 943 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM56-204ENST00000487252 TYMPP19971 482 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 HNF1BP35680 557 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 TNFRSF4P43489 277 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 UCNP55089 124 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 NECTIN1Q15223 517 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 NPY5RQ15761 445 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 NTRK3Q16288 839 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-204ENST00000487252 PHTF2Q8N3S3 785 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 MCPH1Q8NEM0 835 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 OR10T2Q8NGX3 314 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
TRIM56-204ENST00000487252 ACAP3Q96P50 834 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 PNKPQ96T60 521 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 SEPT5Q99719 369 aaPredicted RBP12.66□□□□□ -0.38
TRIM56-204ENST00000487252 CDT1Q9H211 546 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 ZDHHC4Q9NPG8 344 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 GMIPQ9P107 970 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 PCDHA4Q9UN74 947 aa12.66□□□□□ -0.38
TRIM56-204ENST00000487252 KLF18A0A0U1RQI7 1052 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 BRINP1O60477 761 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
TRIM56-204ENST00000487252 HAPLN1P10915 354 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-204ENST00000487252 JUPP14923 745 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 LRPAP1P30533 357 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 HSPA4P34932 840 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 NAMPTP43490 491 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 SLC6A11P48066 632 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
TRIM56-204ENST00000487252 TBC1D25Q3MII6 688 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 MGAT5BQ3V5L5 792 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 USP37Q86T82 979 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 CYP2S1Q96SQ9 504 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 EIF2AK1Q9BQI3 630 aaKnown RBP12.65□□□□□ -0.38
TRIM56-204ENST00000487252 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-204ENST00000487252 TRIM4Q9C037 500 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 TUBGCP4Q9UGJ1 667 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 CYP8B1Q9UNU6 501 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
TRIM56-204ENST00000487252 STK36Q9NRP7 1315 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ITPR2Q14571 2701 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 TMEM131Q92545 1883 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 MYMKA6NI61 221 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 TRIM66O15016 1216 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 PCDHGA12O60330 932 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 APODP05090 189 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 CYP17A1P05093 508 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 USP17L7P0C7H9 530 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 CDK4P11802 303 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 NDUFV2P19404 249 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ACTN2P35609 894 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 GRIA2P42262 883 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 GRK6P43250 576 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 EFNA5P52803 228 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 OSTNP61366 133 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ZXDBP98169 803 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 TARDBPQ13148 414 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIM56-204ENST00000487252 DMP1Q13316 513 aaPredicted RBP12.64□□□□□ -0.39
TRIM56-204ENST00000487252 TAF12Q16514 161 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 CREB3L3Q68CJ9 461 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ARMCX5Q6P1M9 558 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 PADI6Q6TGC4 694 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 MAEAQ7L5Y9 396 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ADGRG2Q8IZP9 1017 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 TMEM130Q8N3G9 435 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
TRIM56-204ENST00000487252 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 LSG1Q9H089 658 aaKnown RBP12.64□□□□□ -0.39
TRIM56-204ENST00000487252 ZCWPW1Q9H0M4 648 aa12.64□□□□□ -0.39
TRIM56-204ENST00000487252 HCN2Q9UL51 889 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms