RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 RIOK1Q9BRS2 568 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 SLC26A6Q9BXS9 759 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 RTFDC1Q9BY42 306 aaPredicted RBP4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 RHOBTB2Q9BYZ6 727 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 CRNKL1Q9BZJ0 848 aaKnown RBP4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 LY9Q9HBG7 655 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 DMRT3Q9NQL9 472 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 GJB4Q9NTQ9 266 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 RCOR1Q9UKL0 485 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 CFAP45Q9UL16 551 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 ZMYM6O95789 1325 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 NHSQ6T4R5 1651 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 BCORQ6W2J9 1755 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 LAMA4Q16363 1823 aa4.85□□□□□ -1.63
TM9SF3-205ENST00000485093 ZNF831Q5JPB2 1677 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 LRP5O75197 1615 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CICQ96RK0 1608 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ZNF536O15090 1300 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 XDHP47989 1333 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 SALL1Q9NSC2 1324 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ITGA10O75578 1167 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CDKL5O76039 1030 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 STC2O76061 302 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 LDHCP07864 332 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 SYN1P17600 705 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 HMGB2P26583 209 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CASRP41180 1078 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 LIFRP42702 1097 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 MAGEA10P43363 369 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 RABGGTBP53611 331 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 EPHB1P54762 984 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 GSTO1P78417 241 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 DSC2Q02487 901 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 TRIM29Q14134 588 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 STK38Q15208 465 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CAMK4Q16566 473 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ZNF568Q3ZCX4 644 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 FAM47AQ5JRC9 791 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 KRT40Q6A162 431 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 APOA5Q6Q788 366 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 DOK3Q7L591 496 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ZNF572Q7Z3I7 529 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 POLNQ7Z5Q5 900 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CCAR1Q8IX12 1150 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 AMOTL1Q8IY63 956 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 TMTC2Q8N394 836 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 SH3RF3Q8TEJ3 882 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ESR2Q92731 530 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 PHKBQ93100 1093 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ZNF622Q969S3 477 aaKnown RBP eCLIP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 TRIM44Q96DX7 344 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 HOOK2Q96ED9 719 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 PGBD1Q96JS3 809 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 USP28Q96RU2 1077 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CRAMP1Q96RY5 1269 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 NUP88Q99567 741 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 UBAC1Q9BSL1 405 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 BDH2Q9BUT1 245 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 LSM14BQ9BX40 385 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 BRIP1Q9BX63 1249 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 FTOQ9C0B1 505 aaKnown RBP eCLIP4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CDH19Q9H159 772 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CD209Q9NNX6 404 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 TLR9Q9NR96 1032 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 POLLQ9UGP5 575 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 ANAPC4Q9UJX5 808 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 CLIC4Q9Y696 253 aa4.84□□□□□ -1.63
TM9SF3-205ENST00000485093 MYH7P12883 1935 aa4.84□□□□□ -1.64
TM9SF3-205ENST00000485093 TCHHQ07283 1943 aa4.84□□□□□ -1.64
TM9SF3-205ENST00000485093 C4BP0C0L5 1744 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 COL1A1P02452 1464 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 ELP1O95163 1332 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 E2F8A0AVK6 867 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 GRXCR1A8MXD5 290 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 KIF28PB7ZC32 967 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 NRP1O14786 923 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 BAG3O95817 575 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 AMY1AP04745 511 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 SLC3A2P08195 630 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 POU2F2P09086 479 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 ALOX15P16050 662 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 RAB27AP51159 221 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 AKAP17AQ02040 695 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 PLP2Q04941 152 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 CCDC173Q0VFZ6 552 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 CRY2Q49AN0 593 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 MFSD14BQ5SR56 506 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 METRNLQ641Q3 311 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 ATL3Q6DD88 541 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 DBX2Q6ZNG2 339 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 C15orf52Q6ZUT6 534 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 APBB1IPQ7Z5R6 666 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 SGMS1Q86VZ5 419 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 FANCBQ8NB91 859 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 MDGA1Q8NFP4 955 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 FBXO18Q8NFZ0 1043 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 TBC1D16Q8TBP0 767 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 NRG4Q8WWG1 115 aa4.83□□□□□ -1.64
TM9SF3-205ENST00000485093 CYFIP2Q96F07 1278 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms