RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 SLC41A1Q8IVJ1 513 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 SLFN12Q8IYM2 578 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 ELMOD1Q8N336 334 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 OXER1Q8TDS5 423 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 SSC4DQ8WTU2 575 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 PSPC1Q8WXF1 523 aaKnown RBP6.39□□□□□ -1.39
VARS-222ENST00000470953 CCDC51Q96ER9 411 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 FAM20AQ96MK3 541 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 JPH2Q9BR39 696 aaPredicted RBP6.39□□□□□ -1.39
VARS-222ENST00000470953 ARHGAP9Q9BRR9 750 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 ATXN3LQ9H3M9 355 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 DHX33Q9H6R0 707 aaKnown RBP6.39□□□□□ -1.39
VARS-222ENST00000470953 GAREM1Q9H706 876 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 OBP2AQ9NY56 170 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 WRAP73Q9P2S5 460 aaPredicted RBP6.39□□□□□ -1.39
VARS-222ENST00000470953 USP20Q9Y2K6 914 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 YIPF1Q9Y548 306 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 WNT6Q9Y6F9 365 aa6.39□□□□□ -1.39
VARS-222ENST00000470953 TRIP11Q15643 1979 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 MYO18AQ92614 2054 aaKnown RBP6.38□□□□□ -1.39
VARS-222ENST00000470953 CYP3A7-CYP3A51PA0A087WV96 503 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 A0A1B0GUA9 196 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 BTBD18B2RXH4 712 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 H3BQV1 296 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 TMEM189-UBE2V1I3L0A0 370 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 M0R2N6 131 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 ZBTB39O15060 712 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 AP5Z1O43299 807 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 PPFIA2O75334 1257 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 CILPO75339 1184 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 RECQL4O94761 1208 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 CLDN1O95832 211 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 OR4Q2P0C623 313 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 CHRM1P11229 460 aaPredicted RBP6.38□□□□□ -1.39
VARS-222ENST00000470953 CYP3A7P24462 503 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 MCM7P33993 719 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 CDR1P51861 262 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 RPL6Q02878 288 aaKnown RBP6.38□□□□□ -1.39
VARS-222ENST00000470953 CYP4A11Q02928 519 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 SOX4Q06945 474 aaPredicted RBP6.38□□□□□ -1.39
VARS-222ENST00000470953 PDE4CQ08493 712 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 MESP2Q0VG99 397 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 NPY5RQ15761 445 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 CRY1Q16526 586 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 UPP1Q16831 310 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 PROX2Q3B8N5 592 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 LMBRD2Q68DH5 695 aaPredicted RBP6.38□□□□□ -1.39
VARS-222ENST00000470953 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 SLC27A1Q6PCB7 646 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 B3GNT9Q6UX72 402 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 MAMDC2Q7Z304 686 aaPredicted RBP6.38□□□□□ -1.39
VARS-222ENST00000470953 TMEM130Q8N3G9 435 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 LEMD2Q8NC56 503 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 ERMNQ8TAM6 284 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 ETNPPLQ8TBG4 499 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 ASAP3Q8TDY4 903 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 SLC7A3Q8WY07 619 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 PGLYRP2Q96PD5 576 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 MDFIQ99750 246 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 SEMA3CQ99985 751 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 LXNQ9BS40 222 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 SLC46A2Q9BY10 475 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 ZDHHC4Q9NPG8 344 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 ARID2Q68CP9 1835 aa6.38□□□□□ -1.39
VARS-222ENST00000470953 LRRK1Q38SD2 2015 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 SGK1O00141 431 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 EML1O00423 815 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 PSMD10O75832 226 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 OR52Z1P0C646 297 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 ZNF883P0CG24 379 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 FDPSP14324 419 aaKnown RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 MAOBP27338 520 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 GABRR2P28476 465 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 TXKP42681 527 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 QARSP47897 775 aaKnown RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 VASPP50552 380 aaPredicted RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 BNC1Q01954 994 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 PPP2R5CQ13362 524 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 CAPSQ13938 189 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 PTPAQ15257 358 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 CTXN3Q4LDR2 81 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 TTC38Q5R3I4 469 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 TPGS2Q68CL5 300 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 HAUS3Q68CZ6 603 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 CCDC81Q6ZN84 652 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 OTUD6AQ7L8S5 288 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 DNAJB7Q7Z6W7 309 aaPredicted RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 NOSTRINQ8IVI9 506 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 TPH2Q8IWU9 490 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 HACE1Q8IYU2 909 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 HMGB4Q8WW32 186 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 USP13Q92995 863 aaPredicted RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 CD101Q93033 1021 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 CEP170P1Q96L14 293 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 ZNF578Q96N58 590 aaPredicted RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 PPP1R10Q96QC0 940 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms